RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 STC1P52823 247 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 PPP1CAP62136 330 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 ATP6AP1LQ52LC2 224 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 YIF1BQ5BJH7 314 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 CLEC12AQ5QGZ9 265 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 Q5W150 140 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 NIPAL1Q6NVV3 410 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 LINC00337Q8N6G1 96 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 SLC25A29Q8N8R3 303 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 LFNGQ8NES3 379 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 TTLQ8NG68 377 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 MRAP2Q96G30 205 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 DCUN1D5Q9BTE7 237 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 ING2Q9H160 280 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 RDH14Q9HBH5 336 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 NYAP2Q9P242 653 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 FBXL3Q9UKT7 428 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 FARSAQ9Y285 508 aaKnown RBP2.89□□□□□ -1.95
VPS13A-211ENST00000484581 V9GYY5 206 aaPredicted RBP2.89□□□□□ -1.95
VPS13A-211ENST00000484581 VWA8A3KMH1 1905 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 MIA3Q5JRA6 1907 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 A0A1B0GXF2 115 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 MPZL2O60487 215 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 UGT2B11O75310 529 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 FOXH1O75593 365 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 DHRS3O75911 302 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 RAB36O95755 333 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 TAC1P20366 129 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 LGALS7P47929 136 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 RPL14P50914 215 aaKnown RBP2.88□□□□□ -1.95
VPS13A-211ENST00000484581 RAB8AP61006 207 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 PITPNAQ00169 270 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 EXOC3L4Q17RC7 722 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 LINC00303Q3SY05 128 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 SDHAF4Q5VUM1 108 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 AP1ARQ63HQ0 302 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 FAM151BQ6UXP7 276 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 Q6ZR03 302 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 USP50Q70EL3 339 aaPredicted RBP2.88□□□□□ -1.95
VPS13A-211ENST00000484581 CYP4Z2PQ8N1L4 340 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 SLC26A10Q8NG04 563 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 OR10G2Q8NGC3 310 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 OR5M1Q8NGP8 315 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 ACTL9Q8TC94 416 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 ORAOV1Q8WV07 137 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 C22orf15Q8WYQ4 148 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 CCL17Q92583 94 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 DDIT4LQ96D03 193 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 FAM210AQ96ND0 272 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 CDX2Q99626 313 aaPredicted RBP2.88□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF426Q9BUY5 554 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 MRPL20Q9BYC9 149 aaKnown RBP2.88□□□□□ -1.95
VPS13A-211ENST00000484581 TBL1XR1Q9BZK7 514 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 UBAP1Q9NZ09 502 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF223Q9UK11 482 aaPredicted RBP2.88□□□□□ -1.95
VPS13A-211ENST00000484581 CELA1Q9UNI1 258 aa2.88□□□□□ -1.95
VPS13A-211ENST00000484581 PTPRTO14522 1441 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 CABIN1Q9Y6J0 2220 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 IGHV3-49A0A0A0MS15 119 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 IGKV6-21A0A0C4DH24 114 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 A0A0G2JMP0 313 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 A0A0X1KG70 313 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 TMEM72A0PK05 275 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 A8MU10 97 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 C9J4A7 227 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 RBFOX2O43251 390 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS13A-211ENST00000484581 COCHO43405 550 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 SYNGR1O43759 233 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 ADAP1O75689 374 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 VAMP5O95183 116 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 ORM1P02763 201 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 SNRPAP09012 282 aaKnown RBP2.87□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF806P0C7X5 589 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 OPRK1P41145 380 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 MED21Q13503 144 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF404Q494X3 552 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 Q499Y3 187 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 ACTBL2Q562R1 376 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 CLLU1OSQ5K130 101 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 LAMTOR1Q6IAA8 161 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 CLEC18BQ6UXF7 455 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 TPGS1Q6ZTW0 290 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 FUNDC1Q8IVP5 155 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 C10orf107Q8IVU9 208 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 OR5T1Q8NG75 326 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 LINC01560Q8TB33 94 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 CIRBP-AS1Q8TBR5 109 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 DNAJB3Q8WWF6 145 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 NEURL3Q96EH8 262 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 TBL1YQ9BQ87 522 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 SUCNR1Q9BXA5 334 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 PLA2G2FQ9BZM2 168 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 MFSD1Q9H3U5 465 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 DHX35Q9H5Z1 703 aaKnown RBP2.87□□□□□ -1.95
VPS13A-211ENST00000484581 ASB7Q9H672 318 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 RHOFQ9HBH0 211 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 ENOPH1Q9UHY7 261 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 INSIG2Q9Y5U4 225 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 LOXHD1Q8IVV2 1947 aa2.87□□□□□ -1.95
VPS13A-211ENST00000484581 NRCAMQ92823 1304 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms