RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 DGCR14Q96DF8 476 aaKnown RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SNF8Q96H20 258 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CEP19Q96LK0 163 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SDHCQ99643 169 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 TLNRD1Q9H1K6 362 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SPNS1Q9H2V7 528 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 POMKQ9H5K3 350 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 FARSAQ9Y285 508 aaKnown RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 MMACHCQ9Y4U1 282 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 KIF26BQ2KJY2 2108 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 THSD7BQ9C0I4 1608 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 A0A1W2PP64 1363 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 FLT4P35916 1363 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 EIF3AQ14152 1382 aaKnown RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 NRCAMQ92823 1304 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 A0A0U1RQV1 116 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 A0A1B0GUA9 196 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 METTL15A6NJ78 407 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 TMEM238C9JI98 176 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 H7C423 109 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 MANBAO00462 879 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 FADS1O60427 444 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 IGHV3-13P01766 116 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 IGKV5-2P06315 115 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 G0S2P27469 103 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 CBX5P45973 191 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 LGALS7P47929 136 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 CCL23P55773 120 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 RANP62826 216 aaKnown RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 HIST3H3Q16695 136 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 FAM162BQ5T6X4 162 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 NIT1Q86X76 327 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 GID4Q8IVV7 300 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF485Q8NCK3 441 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 GPR32P1Q8NGA4 272 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 OR4C13Q8NGP0 309 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF420Q8TAQ5 688 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 DTD1Q8TEA8 209 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 DCAKDQ8WVC6 231 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 CYGBQ8WWM9 190 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 ANKRD9Q96BM1 317 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 IMP4Q96G21 291 aaKnown RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 SMIM8Q96KF7 97 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 CEP170P1Q96L14 293 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 PRRT1Q99946 306 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 ULBP1Q9BZM6 244 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 METTL17Q9H7H0 456 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 DMAC2Q9NW81 257 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 RBFOX1Q9NWB1 397 aaKnown RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 LSM5Q9Y4Y9 91 aaKnown RBP3.28□□□□□ -1.88
PTCD3-214ENST00000483925 DENND4AQ7Z401 1863 aa3.28□□□□□ -1.88
PTCD3-214ENST00000483925 ADAMTSL3P82987 1691 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 A0A1W2PPR1 153 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 H0YJX3 145 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 TNFSF13O75888 250 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 CIAO1O76071 339 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 HLA-DPB1P04440 258 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 SPNP16150 400 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 ALOX5APP20292 161 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 TCL1AP56279 114 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 C1QTNF8P60827 252 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 SMAGPQ0VAQ4 97 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 OR2F1Q13607 317 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 PMVKQ15126 192 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 PTGES3Q15185 160 aaKnown RBP3.27□□□□□ -1.89
PTCD3-214ENST00000483925 FBXL19-AS1Q494R0 122 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 C6orf99Q4VX62 202 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 TMEM255AQ5JRV8 349 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 MARC1Q5VT66 337 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 ZNF343Q6P1L6 599 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 DGAT2L6Q6ZPD8 337 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 PXT1Q8NFP0 134 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 NPBQ8NG41 125 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 TEX47Q8TBZ9 253 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 SLC37A2Q8TED4 501 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 MARC2Q969Z3 335 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 PPCDCQ96CD2 204 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 LRRC58Q96CX6 371 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 FBXL15Q9H469 300 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 NUFIP1Q9UHK0 495 aaKnown RBP3.27□□□□□ -1.89
PTCD3-214ENST00000483925 PSG8Q9UQ74 426 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 ALG5Q9Y673 324 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 ZFYVE9O95405 1425 aa3.27□□□□□ -1.89
PTCD3-214ENST00000483925 ROCK1Q13464 1354 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 ZNF532Q9HCE3 1301 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 IGHV3-74A0A0B4J1X5 117 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 IGKV1-8A0A0C4DH67 115 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 A0A1B0GXF2 115 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 PGPA6NDG6 321 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 FAM183AA6NL82 134 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 NPIPB7O75200 414 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 PDCD6O75340 191 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 GABARAPO95166 117 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 CFC1BP0CG36 223 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 CFC1P0CG37 223 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 ME2P23368 584 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 OMGP23515 440 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms