RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ST6GAL1P15907 406 aa9.19□□□□□ -0.94
COL12A1-207ENST00000483888 RPS4Y1P22090 263 aaKnown RBP9.19□□□□□ -0.94
COL12A1-207ENST00000483888 NUTF2P61970 127 aaKnown RBP9.19□□□□□ -0.94
COL12A1-207ENST00000483888 GVQW1Q8N7I0 195 aa9.19□□□□□ -0.94
COL12A1-207ENST00000483888 SLC16A11Q8NCK7 471 aa9.19□□□□□ -0.94
COL12A1-207ENST00000483888 GMPPAQ96IJ6 420 aaPredicted RBP9.19□□□□□ -0.94
COL12A1-207ENST00000483888 C16orf70Q9BSU1 422 aa9.19□□□□□ -0.94
COL12A1-207ENST00000483888 CACFD1Q9UGQ2 172 aa9.19□□□□□ -0.94
COL12A1-207ENST00000483888 AREGP15514 252 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 TNFSF10P50591 281 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 SAP30LQ9HAJ7 183 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 HEPACAM2A8MVW5 462 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 SRSF10O75494 262 aaKnown RBP9.18□□□□□ -0.94
COL12A1-207ENST00000483888 IGHEP01854 428 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 PPP2CBP62714 309 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 WDR13Q9H1Z4 485 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 KMT2EQ8IZD2 1858 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 BLACEA4D250 179 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 LBX2Q6XYB7 198 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 GRASPQ7Z6J2 395 aaPredicted RBP9.18□□□□□ -0.94
COL12A1-207ENST00000483888 UBALD1Q8TB05 177 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 ZNF346Q9UL40 294 aaKnown RBP9.18□□□□□ -0.94
COL12A1-207ENST00000483888 NPIPB8E9PQR5 432 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 UBE2CO00762 179 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 NPIPB7O75200 414 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 MYBPHQ13203 477 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 LAIR1Q6GTX8 287 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 VCX2Q9H322 139 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 PRAMEF26H0Y7S4 382 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 HPRT1P00492 218 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 GLIPR1P48060 266 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 DLX1P56177 255 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 LYSMD4Q5XG99 296 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 OR10S1Q8NGN2 331 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 ST3GAL6Q9Y274 331 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 HOXB2P14652 356 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 C21orf58P58505 322 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 TMEM176BQ3YBM2 270 aaPredicted RBP9.18□□□□□ -0.94
COL12A1-207ENST00000483888 PYCR3Q53H96 274 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 HSD11B1LQ7Z5J1 315 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 SMIM14Q96QK8 99 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 MS4A8Q9BY19 250 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 ELOVL5Q9NYP7 299 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 TMPRSS11DO60235 418 aa9.18□□□□□ -0.94
COL12A1-207ENST00000483888 A0A0J9YY10 115 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 CYBAP13498 195 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 SCAND1P57086 179 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 MIEN1Q9BRT3 115 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 CD207Q9UJ71 328 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 TMEM131LA2VDJ0 1609 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 SIRPB1O00241 398 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 RPS27P42677 84 aaKnown RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 SLC35B1P78383 322 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 BTG2P78543 158 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 SNAI3Q3KNW1 292 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 MED25Q71SY5 747 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 CALHM3Q86XJ0 350 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 OR11H4Q8NGC9 324 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 ZNF775Q96BV0 537 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 MED12Q93074 2177 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 ASPDHA6ND91 283 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 GRPP07492 148 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 HHEXQ03014 270 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 OR5AS1Q8N127 324 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 NUP37Q8NFH4 326 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 CNTD2Q9H8S5 307 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 OR2W1Q9Y3N9 320 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 C5P01031 1676 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 SCN11AQ9UI33 1791 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 DUSP5Q16690 384 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 FAM219AQ8IW50 185 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 CLDN23Q96B33 292 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 KIDINS220Q9ULH0 1771 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 GALR2O43603 387 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 FCARP24071 287 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 RIGQ13278 110 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 TXNIPQ9H3M7 391 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 AAMDCQ9H7C9 122 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 MARCH5Q9NX47 278 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 CD70P32970 193 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 FLT3LGP49771 235 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 PARS2Q7L3T8 475 aaKnown RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 LRRC75AQ8NAA5 344 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 BHLHE23Q8NDY6 225 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 ABHD3Q8WU67 409 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 PTPMT1Q8WUK0 201 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 TDRD6O60522 2096 aaKnown RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 MEX3AA1L020 520 aaKnown RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 FUT3P21217 361 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 DCAF12L2Q5VW00 463 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 OR1N2Q8NGR9 330 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 TMEM147Q9BVK8 224 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 MCTS1Q9ULC4 181 aaKnown RBP9.17□□□□□ -0.94
COL12A1-207ENST00000483888 DPRXA6NFQ7 191 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 PAGE4O60829 102 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 LPAR4Q99677 370 aa9.17□□□□□ -0.94
COL12A1-207ENST00000483888 CITED2Q99967 270 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms