RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 K7EN84 100 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 M0R1B8 84 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 OR5AC1P0C628 307 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 SEC11BP0C7V7 166 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 INAFM2P0DMQ5 153 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 HLA-GP17693 338 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 RGS6P49758 472 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 UBE2IP63279 158 aaKnown RBP2.75□□□□□ -1.97
SF3B1-210ENST00000482158 TPM4P67936 248 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 GNA13Q14344 377 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 ZNF235Q14590 738 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 TAL2Q16559 108 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 HNRNPA1L2Q32P51 320 aaKnown RBP2.75□□□□□ -1.97
SF3B1-210ENST00000482158 APOBEC3HQ6NTF7 200 aaKnown RBP2.75□□□□□ -1.97
SF3B1-210ENST00000482158 C8orf74Q6P047 294 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 SYCE1Q8N0S2 351 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 ZFP62Q8NB50 900 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-210ENST00000482158 CLHC1Q8NHS4 586 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 YIPF6Q96EC8 236 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 TMED9Q9BVK6 235 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 PSTPIP2Q9H939 334 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 C6orf50Q9HD87 102 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 FAM60AQ9NP50 221 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 HMGXB4Q9UGU5 601 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 PRELID1Q9Y255 219 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 KLF13Q9Y2Y9 288 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-210ENST00000482158 AQRO60306 1485 aaKnown RBP eCLIP2.75□□□□□ -1.97
SF3B1-210ENST00000482158 DYSFO75923 2080 aa2.75□□□□□ -1.97
SF3B1-210ENST00000482158 CACNA1DQ01668 2161 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 AK9Q5TCS8 1911 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 TRAV8-7A0A075B6U6 113 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 ERICH2A1L162 156 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 TVP23AA6NH52 213 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 ZW10O43264 779 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 CBR3O75828 277 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 KLHL2O95198 593 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 OR4Q2P0C623 313 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 LIPCP11150 499 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 HTR2CP28335 458 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 TEAD1P28347 426 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 OR12D2P58182 307 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 BASP1P80723 227 aaKnown RBP2.74□□□□□ -1.97
SF3B1-210ENST00000482158 XIAPP98170 497 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 ATP5G2Q06055 141 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 LAMTOR4Q0VGL1 99 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 PMVKQ15126 192 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 KCTD16Q68DU8 428 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 SLC25A25Q6KCM7 469 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 NT5DC3Q86UY8 548 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 ITPRIPQ8IWB1 547 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 NT5CQ8TCD5 201 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 MITD1Q8WV92 249 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 COA1Q9GZY4 146 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 RDH14Q9HBH5 336 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 TREM1Q9NP99 234 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 CD300AQ9UGN4 299 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 PRO0628Q9UI54 55 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 SLC7A11Q9UPY5 501 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 V9GYY9 64 aa2.74□□□□□ -1.97
SF3B1-210ENST00000482158 EVC2Q86UK5 1308 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 LTBP4Q8N2S1 1624 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 A0A1W2PNN7 141 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 OR6C70A6NIJ9 312 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 IQCF5A8MTL0 148 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 GATCO43716 136 aaKnown RBP2.73□□□□□ -1.97
SF3B1-210ENST00000482158 P0C880 135 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 HOXA6P31267 233 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 PSMB2P49721 201 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 IL5RAQ01344 420 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 TOMM34Q15785 309 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-210ENST00000482158 HSP90AA4PQ58FG1 418 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 THOC7Q6I9Y2 204 aaKnown RBP2.73□□□□□ -1.97
SF3B1-210ENST00000482158 FAM173BQ6P4H8 233 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 FA2HQ7L5A8 372 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 CA13Q8N1Q1 262 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 ASCC1Q8N9N2 400 aaKnown RBP2.73□□□□□ -1.97
SF3B1-210ENST00000482158 DNAAF3Q8N9W5 541 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 OR4D6Q8NGJ1 314 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 OR13C9Q8NGT0 318 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 ITLN2Q8WWU7 325 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-210ENST00000482158 TM6SF2Q9BZW4 377 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 ZNF302Q9NR11 478 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 NRBP2Q9NSY0 501 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 TMEM38BQ9NVV0 291 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 ZNF492Q9P255 531 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 PRR14LQ5THK1 2151 aa2.73□□□□□ -1.97
SF3B1-210ENST00000482158 GSTTP1A0A1W2PQM5 241 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 SEC14L6B5MCN3 397 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 RFXANKO14593 260 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 CRTAPO75718 401 aaPredicted RBP2.72□□□□□ -1.97
SF3B1-210ENST00000482158 DHRS3O75911 302 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 NRASP01111 189 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 HRASP01112 189 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 KRASP01116 189 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 IGKV4-1P06312 121 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 HLA-DMAP28067 261 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 B2MP61769 119 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 RPL10AP62906 217 aaKnown RBP2.72□□□□□ -1.97
SF3B1-210ENST00000482158 C6orf183Q5T699 404 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms