RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 IL13RA2Q14627 380 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 OR51A4Q8NGJ6 313 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 STARD10Q9Y365 291 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 BLOC1S1P78537 153 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 PLA2G7Q13093 441 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 OR2J1Q9GZK6 312 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 LPAR3Q9UBY5 353 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 PLXNB3Q9ULL4 1909 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 SAP30LQ9HAJ7 183 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A10PA6NDY2 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A18PA6NE21 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A16PA6NEW6 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A20PA6NIJ5 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A8PA6NJQ4 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A7PA6NKC0 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A22PA8MWA6 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A12PA8MX19 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A5PA8MXJ8 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A23PA8MXZ1 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A15PP0C7V4 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A13PP0C7W8 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A14PP0C7W9 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 FAM90A24PP0C7X0 464 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 PXT1Q8NFP0 134 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 RPS4Y2Q8TD47 263 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 PPP1R3CQ9UQK1 317 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 RAXQ9Y2V3 346 aa16.77■□□□□ 0.28
CCM2-214ENST00000481194 DTYMKP23919 212 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 HLXQ14774 488 aaPredicted RBP16.77■□□□□ 0.27
CCM2-214ENST00000481194 TMEM128Q5BJH2 165 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 TIMM23BQ5SRD1 257 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 MDS2Q8NDY4 140 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 MARCH1Q8TCQ1 289 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 ARL11Q969Q4 196 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 NPTNQ9Y639 398 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 SAXO1Q8IYX7 474 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 NUDT16L1Q9BRJ7 211 aaKnown RBP16.77■□□□□ 0.27
CCM2-214ENST00000481194 RTN4RQ9BZR6 473 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 TINAGQ9UJW2 476 aa16.77■□□□□ 0.27
CCM2-214ENST00000481194 H3BMH7 237 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 BCL3P20749 454 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 ASCL1P50553 236 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 SURF2Q15527 256 aaPredicted RBP16.76■□□□□ 0.27
CCM2-214ENST00000481194 MAFIPQ8WZ33 124 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 FAAP24Q9BTP7 215 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 FANCMQ8IYD8 2048 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 SNCAP37840 140 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 BEX5Q5H9J7 111 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 C6orf201Q7Z4U5 140 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 TMEM123Q8N131 208 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 SLC35G3Q8N808 338 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 KCNIP2Q9NS61 270 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 ZNF106Q9H2Y7 1883 aaKnown RBP16.76■□□□□ 0.27
CCM2-214ENST00000481194 HEATR5BQ9P2D3 2071 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 HAND1O96004 215 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 ADRA2CP18825 462 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 C1orf100Q5SVJ3 147 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 POM121Q96HA1 1249 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 ARPC5LQ9BPX5 153 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 MRPL13Q9BYD1 178 aaKnown RBP16.76■□□□□ 0.27
CCM2-214ENST00000481194 PKIBQ9C010 78 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 PURGQ9UJV8 347 aaKnown RBP16.76■□□□□ 0.27
CCM2-214ENST00000481194 I3L521 148 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 TLE1Q04724 770 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 DMRTC1Q5HYR2 192 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 DRAXINQ8NBI3 349 aaPredicted RBP16.76■□□□□ 0.27
CCM2-214ENST00000481194 OR5AP2Q8NGF4 316 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 OR51H1Q8NH63 302 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 PIK3IP1Q96FE7 263 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 ZDHHC8Q9ULC8 765 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 V9GYH0 126 aa16.76■□□□□ 0.27
CCM2-214ENST00000481194 OR5H1A6NKK0 313 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 C17orf112F2Z3M2 114 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 TGM6O95932 706 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 ENDOGQ14249 297 aaKnown RBP16.75■□□□□ 0.27
CCM2-214ENST00000481194 SCMH1Q96GD3 660 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 VSIG8P0DPA2 414 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 COL25A1Q9BXS0 654 aaPredicted RBP16.75■□□□□ 0.27
CCM2-214ENST00000481194 OCEL1Q9H607 264 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 PIGPP57054 158 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 LINC00303Q3SY05 128 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 MIXL1Q9H2W2 232 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 ZMIZ1Q9ULJ6 1067 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 SF3B6Q9Y3B4 125 aaKnown RBP16.75■□□□□ 0.27
CCM2-214ENST00000481194 CLDN16Q9Y5I7 305 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 IGKV3D-15A0A087WSY6 115 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 A0A0A6YYJ9 748 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 ST8SIA3O43173 380 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 RAMP1O60894 148 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 KIR2DS2P43631 304 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 TBR1Q16650 682 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 RTN4IP1Q8WWV3 396 aaPredicted RBP16.75■□□□□ 0.27
CCM2-214ENST00000481194 TAS2R3Q9NYW6 316 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 ALPK3Q96L96 1907 aa16.75■□□□□ 0.27
CCM2-214ENST00000481194 B3GALNT1O75752 331 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 PRF1P14222 555 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 ATF4P18848 351 aaPredicted RBP16.74■□□□□ 0.27
CCM2-214ENST00000481194 ST8SIA4Q92187 359 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 CCL17Q92583 94 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 TMEM8BA6NDV4 472 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms