RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MRPL57Q9BQC6 102 aaKnown RBP3.37□□□□□ -1.87
UPF3A-207ENST00000481131 GABARAPL3Q9BY60 117 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 SHCBP1LQ9BZQ2 653 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 FANCEQ9HB96 536 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 CTPS2Q9NRF8 586 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 OPTCQ9UBM4 332 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 CTSFQ9UBX1 484 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 RNF11Q9Y3C5 154 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 CACNA1BQ00975 2339 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 BSNQ9UPA5 3926 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 SPENQ96T58 3664 aaKnown RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 IGSF10Q6WRI0 2623 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 KCNE1BA0A087WTH5 132 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 A0A1B0GX78 115 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 SYCE1LA8MT33 242 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 C9JVG2 144 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 UBFD1O14562 309 aaKnown RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 MRPS12O15235 138 aaKnown RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 RDH16O75452 317 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ETHE1O95571 254 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 RBP1P09455 135 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 C1GALT1C1LP0DN25 315 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 MYL2P10916 166 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 PSG2P11465 335 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 TCN2P20062 427 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ALDH3A1P30838 453 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 AQP2P41181 271 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 CCNG1P51959 295 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 PRRX1P54821 245 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 FOXA1P55317 472 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 RAB8AP61006 207 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 RPS15AP62244 130 aaKnown RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ACTA2P62736 377 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ACTG2P63267 376 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ACTC1P68032 377 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ACTA1P68133 377 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 PAX5Q02548 391 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 IRF8Q02556 426 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 CASP8Q14790 479 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 RCN1Q15293 331 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 NKAIN1Q4KMZ8 207 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 DEFB134Q4QY38 66 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 TTMPQ5BVD1 217 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 TNFAIP8L3Q5GJ75 292 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 CDKL4Q5MAI5 379 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF678Q5SXM1 525 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 MLIPQ5VWP3 458 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ANKRD26P1Q6NSI1 321 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 SCIMPQ6UWF3 145 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 C10orf107Q8IVU9 208 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 TCAIMQ8N3R3 496 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 RIBC1Q8N443 379 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 CCNYL1Q8N7R7 359 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 TTC29Q8NA56 475 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 OR5T3Q8NGG3 340 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 OR51G1Q8NGK1 321 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 TCP10LQ8TDR4 215 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 STARD8Q92502 1023 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 RERGQ96A58 199 aaPredicted RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 CCDC126Q96EE4 140 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 AIF1LQ9BQI0 150 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM109Q9BVC6 243 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 SLC7A5P2Q9GIP4 190 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 CHRNA10Q9GZZ6 450 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 PCBD2Q9H0N5 130 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 NEK6Q9HC98 313 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 LHX9Q9NQ69 397 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF226Q9NYT6 803 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 NUFIP1Q9UHK0 495 aaKnown RBP3.36□□□□□ -1.87
UPF3A-207ENST00000481131 PITPNC1Q9UKF7 332 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ING4Q9UNL4 249 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 ZFYVE26Q68DK2 2539 aa3.36□□□□□ -1.87
UPF3A-207ENST00000481131 NCKAP5O14513 1909 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 BOD1L1Q8NFC6 3051 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 UQCRHLA0A096LP55 91 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TRBV6-6A0A0A6YYG2 114 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 PLAC8L1A1L4L8 177 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 NKX2-6A6NCS4 301 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 F6UB75 175 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 RRP8O43159 456 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 ERI3O43414 337 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 EEDO75530 441 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 KLF7O75840 302 aaPredicted RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 UTS2O95399 124 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CLIC3O95833 236 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 C6orf47O95873 294 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 PDYNP01213 254 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 UQCRHP07919 91 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 SLC35G6P0C7Q6 338 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TAC1P20366 129 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CD82P27701 267 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 SERPINB5P36952 375 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 NAA10P41227 235 aaPredicted RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 NMUP48645 174 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 SSR4P51571 173 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CCR6P51684 374 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 MAGOHP61326 146 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 DCDP81605 110 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CDC20Q12834 499 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 NCF4Q15080 339 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms