RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 CD177Q8N6Q3 437 aa17.17■□□□□ 0.34
NELFE-208ENST00000481121 C8orf46Q8TAG6 207 aa17.17■□□□□ 0.34
NELFE-208ENST00000481121 EMG1Q92979 244 aaKnown RBP17.17■□□□□ 0.34
NELFE-208ENST00000481121 RFT1Q96AA3 541 aa17.17■□□□□ 0.34
NELFE-208ENST00000481121 SPACA5Q96QH8 159 aa17.17■□□□□ 0.34
NELFE-208ENST00000481121 JMJD8Q96S16 334 aa17.17■□□□□ 0.34
NELFE-208ENST00000481121 TBX15Q96SF7 602 aa17.17■□□□□ 0.34
NELFE-208ENST00000481121 ELL3Q9HB65 397 aaPredicted RBP17.17■□□□□ 0.34
NELFE-208ENST00000481121 KPTNQ9Y664 436 aa17.17■□□□□ 0.34
NELFE-208ENST00000481121 F8VVB4 439 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 F8VWA3 439 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 VENTXO95231 258 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 C21orf33P30042 268 aaPredicted RBP17.16■□□□□ 0.34
NELFE-208ENST00000481121 DMRTB1Q96MA1 342 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 FKBP14Q9NWM8 211 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 SIRT4Q9Y6E7 314 aaPredicted RBP17.16■□□□□ 0.34
NELFE-208ENST00000481121 A0A1W2PQ09 198 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 OGG1O15527 345 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 SPRY1O43609 319 aaPredicted RBP17.16■□□□□ 0.34
NELFE-208ENST00000481121 TAS2R43P59537 309 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 C6orf141Q5SZD1 244 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 FIP1L1Q6UN15 594 aaKnown RBP17.16■□□□□ 0.34
NELFE-208ENST00000481121 RBMS3Q6XE24 437 aaKnown RBP17.16■□□□□ 0.34
NELFE-208ENST00000481121 PHC2Q8IXK0 858 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 CMTM4Q8IZR5 234 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 KIR3DL3Q8N743 410 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 ZFP41Q8N8Y5 198 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 ZNF485Q8NCK3 441 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 OR5D18Q8NGL1 313 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 SCN3BQ9NY72 215 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 ZNF281Q9Y2X9 895 aa17.16■□□□□ 0.34
NELFE-208ENST00000481121 TRBV23-1A0A0A0MS06 115 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 ALX3O95076 343 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 ATP6V1G2O95670 118 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 BCL3P20749 454 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 MYF6P23409 242 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 HSPA13P48723 471 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 WNT4P56705 351 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 PDZK1IP1Q13113 114 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 PDCD1Q15116 288 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 DMKNQ6E0U4 476 aaPredicted RBP17.15■□□□□ 0.34
NELFE-208ENST00000481121 BRD3OSQ6XYD6 125 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 C9orf139Q6ZV77 190 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 BCL6BQ8N143 479 aaPredicted RBP17.15■□□□□ 0.34
NELFE-208ENST00000481121 TMEM106AQ96A25 262 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 ANKRD60Q9BZ19 345 aa17.15■□□□□ 0.34
NELFE-208ENST00000481121 RBFOX1Q9NWB1 397 aaKnown RBP17.15■□□□□ 0.34
NELFE-208ENST00000481121 ANGPTL7O43827 346 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 RAB3AP20336 220 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 NPBWR2P48146 333 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 RIPK1Q13546 671 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 VMO1Q7Z5L0 202 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 SIGLECL1Q8N7X8 197 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 ASCC1Q8N9N2 400 aaKnown RBP17.14■□□□□ 0.33
NELFE-208ENST00000481121 GHSRQ92847 366 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 CPNE2Q96FN4 548 aaPredicted RBP17.14■□□□□ 0.33
NELFE-208ENST00000481121 C19orf24Q9BVV8 132 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 TAS2R4Q9NYW5 299 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 ERGIC3Q9Y282 383 aa17.14■□□□□ 0.33
NELFE-208ENST00000481121 PTGES3LE9PB15 166 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 CDK1P06493 297 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 COL10A1Q03692 680 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 KISS1Q15726 138 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 FAM185AQ8N0U4 392 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 FAM58AQ8N1B3 248 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 OR13C5Q8NGS8 318 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 LHX4Q969G2 390 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 MYDGFQ969H8 173 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 DNHD1Q96M86 4753 aa17.13■□□□□ 0.33
NELFE-208ENST00000481121 PNMA8CA0A1B0GUJ8 204 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 MAGEB3O15480 346 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 TK1P04183 234 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 CHRM2P08172 466 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 PRKACAP17612 351 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 BPIFB3P59826 476 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 TUSC1Q2TAM9 212 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 YIF1BQ5BJH7 314 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 RUSC1-AS1Q66K80 236 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 ASPHD2Q6ICH7 369 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 RNF144BQ7Z419 303 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 NANOGP1Q8N7R0 232 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 PGLYRP3Q96LB9 341 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 MND1Q9BWT6 205 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 FAM234AQ9H0X4 552 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 IL36RNQ9UBH0 155 aa17.12■□□□□ 0.33
NELFE-208ENST00000481121 CENPVL3A0A0U1RRI6 287 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 TRIM77I1YAP6 450 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 HAND1O96004 215 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 SNU13P55769 128 aaKnown RBP17.11■□□□□ 0.33
NELFE-208ENST00000481121 PPP3R1P63098 170 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 ZNF529Q6P280 563 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 CRIP3Q6Q6R5 217 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 SAXO1Q8IYX7 474 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 OR51A2Q8NGJ7 313 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 ZFAND2BQ8WV99 257 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 ZNF48Q96MX3 618 aaPredicted RBP17.11■□□□□ 0.33
NELFE-208ENST00000481121 SIRT7Q9NRC8 400 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 C19orf12Q9NSK7 152 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 STAB1Q9NY15 2570 aa17.11■□□□□ 0.33
NELFE-208ENST00000481121 IGKV1-12A0A0C4DH73 117 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms