RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PGA3P0DJD8 388 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 ZNF43P17038 809 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 FBLP22087 321 aaKnown RBP18.09■□□□□ 0.49
COL13A1-208ENST00000479733 SFTPDP35247 375 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 GAMTQ14353 236 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 PDCD1Q15116 288 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 RSU1Q15404 277 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 SSC4DQ8WTU2 575 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 PRDM13Q9H4Q3 707 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 ZNF160Q9HCG1 818 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 PHF1O43189 567 aaPredicted RBP18.09■□□□□ 0.49
COL13A1-208ENST00000479733 SPRY1O43609 319 aaPredicted RBP18.09■□□□□ 0.49
COL13A1-208ENST00000479733 JMJD7P0C870 316 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 CSNK1A1P48729 337 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 SUCLG1P53597 346 aaKnown RBP18.09■□□□□ 0.49
COL13A1-208ENST00000479733 TMEM176BQ3YBM2 270 aaPredicted RBP18.09■□□□□ 0.49
COL13A1-208ENST00000479733 GPR157Q5UAW9 335 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 SSX9Q7RTT3 188 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 RLN3Q8WXF3 142 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 KLHDC7BQ96G42 594 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 TGIF2Q9GZN2 237 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 OPA3Q9H6K4 179 aa18.09■□□□□ 0.49
COL13A1-208ENST00000479733 LRP4O75096 1905 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 RNF4P78317 190 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 C17orf67Q0P5P2 114 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 LRRC18Q8N456 261 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 CYB561D1Q8N8Q1 229 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 CCDC54Q8NEL0 328 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 ST8SIA1Q92185 356 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 MAGT1Q9H0U3 335 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 ALKBH4Q9NXW9 302 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 KLRF1Q9NZS2 232 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 PPP4R1LQ9P1A2 415 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 AK3Q9UIJ7 227 aa18.08■□□□□ 0.49
COL13A1-208ENST00000479733 CCDC187A0A096LP49 1063 aa18.08■□□□□ 0.48
COL13A1-208ENST00000479733 NXPH3O95157 252 aa18.08■□□□□ 0.48
COL13A1-208ENST00000479733 FABP4P15090 132 aa18.08■□□□□ 0.48
COL13A1-208ENST00000479733 ATP6V0CP27449 155 aa18.08■□□□□ 0.48
COL13A1-208ENST00000479733 EWSR1Q01844 656 aaKnown RBP eCLIP18.08■□□□□ 0.48
COL13A1-208ENST00000479733 DEFB133Q30KQ1 61 aa18.08■□□□□ 0.48
COL13A1-208ENST00000479733 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.08■□□□□ 0.48
COL13A1-208ENST00000479733 ZNF429Q86V71 674 aa18.08■□□□□ 0.48
COL13A1-208ENST00000479733 TLCD2A6NGC4 264 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 OR1L3Q8NH93 324 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 SLC2A9Q9NRM0 540 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 GPR173Q9NS66 373 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 UFSP2Q9NUQ7 469 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 OR5H15A6NDH6 313 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 ZNF726A6NNF4 738 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 PPP1R2P9O14990 202 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 DBHP09172 617 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 DUSP1P28562 367 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 GNMTQ14749 295 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 TMEM217Q8N7C4 229 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 ZNF441Q8N8Z8 693 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 RALGAPA1Q6GYQ0 2036 aa18.07■□□□□ 0.48
COL13A1-208ENST00000479733 F10P00742 488 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 MAS1LP35410 378 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 NKX6-1P78426 367 aaPredicted RBP18.06■□□□□ 0.48
COL13A1-208ENST00000479733 KHDC3LQ587J8 217 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 LFNGQ8NES3 379 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 KLHL13Q9P2N7 655 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 SLC7A11Q9UPY5 501 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 FAM230AA0A1W2PPH8 454 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 HSD17B6O14756 317 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 BLKP51451 505 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 HIKESHIQ53FT3 197 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 LIAT1Q6ZQX7 453 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 GALNT14Q96FL9 552 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 PIAS3Q9Y6X2 628 aa18.06■□□□□ 0.48
COL13A1-208ENST00000479733 CCDC85CA6NKD9 419 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 CCL1P22362 96 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 LMO1P25800 156 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 ECI1P42126 302 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 MTCP1P56278 107 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 OR2T2Q6IF00 324 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 DMRTC2Q8IXT2 367 aaPredicted RBP18.05■□□□□ 0.48
COL13A1-208ENST00000479733 BATF2Q8N1L9 274 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 GPHA2Q96T91 129 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 NECAP2Q9NVZ3 263 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 ZNF724A8MTY0 619 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 CST7O76096 145 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 FOSL1P15407 271 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 RUNX1Q01196 453 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 SPSB3Q6PJ21 355 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 SLC22A25Q6T423 547 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 SLC35G3Q8N808 338 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 ZNF587BE7ETH6 402 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 TRAF3IP2O43734 574 aaPredicted RBP18.05■□□□□ 0.48
COL13A1-208ENST00000479733 CD63P08962 238 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 FOSL2P15408 326 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 HIST1H1BP16401 226 aaKnown RBP18.05■□□□□ 0.48
COL13A1-208ENST00000479733 ZNF41P51814 821 aaPredicted RBP18.05■□□□□ 0.48
COL13A1-208ENST00000479733 TM2D1Q9BX74 207 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 SDHAF3Q9NRP4 125 aa18.05■□□□□ 0.48
COL13A1-208ENST00000479733 ADAMTS9Q9P2N4 1935 aa18.04■□□□□ 0.48
COL13A1-208ENST00000479733 NPIPB13A6NJU9 1138 aa18.04■□□□□ 0.48
COL13A1-208ENST00000479733 NPIPB4C9JG80 1138 aa18.04■□□□□ 0.48
COL13A1-208ENST00000479733 SRP19P09132 144 aaKnown RBP18.04■□□□□ 0.48
COL13A1-208ENST00000479733 MDKP21741 143 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms