RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 RFT1Q96AA3 541 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 ZNF48Q96MX3 618 aaPredicted RBP12.85□□□□□ -0.35
HMGA1-206ENST00000478214 ESM1Q9NQ30 184 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 KPTNQ9Y664 436 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 SLC1A7O00341 560 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 OGG1O15527 345 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 SPRY1O43609 319 aaPredicted RBP12.84□□□□□ -0.35
HMGA1-206ENST00000478214 KNG1P01042 644 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 NPBWR2P48146 333 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 SERPINA12Q8IW75 414 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 STX19Q8N4C7 294 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 PARP16Q8N5Y8 322 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 ZFP41Q8N8Y5 198 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 OR5D14Q8NGL3 314 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 GPR148Q8TDV2 347 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 SMIM19Q96E16 107 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 FKBP14Q9NWM8 211 aa12.84□□□□□ -0.35
HMGA1-206ENST00000478214 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 SULT1B1O43704 296 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 ANGPTL7O43827 346 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 CYB5AP00167 134 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 CALCBP10092 127 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 BCL3P20749 454 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
HMGA1-206ENST00000478214 C6orf141Q5SZD1 244 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 RUSC1-AS1Q66K80 236 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 ASPHD2Q6ICH7 369 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 CRIP3Q6Q6R5 217 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 RBMS3Q6XE24 437 aaKnown RBP12.83□□□□□ -0.36
HMGA1-206ENST00000478214 C9orf139Q6ZV77 190 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 VMO1Q7Z5L0 202 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 MKXQ8IYA7 352 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.83□□□□□ -0.36
HMGA1-206ENST00000478214 ZDHHC22Q8N966 263 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 OR5D18Q8NGL1 313 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 OR13C5Q8NGS8 318 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 SPATA3Q8NHX4 192 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 EMG1Q92979 244 aaKnown RBP12.83□□□□□ -0.36
HMGA1-206ENST00000478214 LHX4Q969G2 390 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 DMRTB1Q96MA1 342 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 JMJD8Q96S16 334 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 RBFOX1Q9NWB1 397 aaKnown RBP12.83□□□□□ -0.36
HMGA1-206ENST00000478214 IL36RNQ9UBH0 155 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 ZNF281Q9Y2X9 895 aa12.83□□□□□ -0.36
HMGA1-206ENST00000478214 IGKV1-12A0A0C4DH73 117 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 MDFIC2A0A1B0GVS7 189 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 A0A1W2PQ09 198 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 ALX3O95076 343 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 IGKV1D-12P01611 117 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 HCKP08631 526 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 DLX1P56177 255 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 COL10A1Q03692 680 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 DOC2BQ14184 412 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 PDCD1Q15116 288 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 DMKNQ6E0U4 476 aaPredicted RBP12.82□□□□□ -0.36
HMGA1-206ENST00000478214 PDZD9Q8IXQ8 264 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 Q8IYB0 196 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 CMTM4Q8IZR5 234 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 FAM58AQ8N1B3 248 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 KIR3DL3Q8N743 410 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 Q8N7P7 452 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 OR51A2Q8NGJ7 313 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 GHSRQ92847 366 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 VCX3BQ9H321 246 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 NEK6Q9HC98 313 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 SIRT7Q9NRC8 400 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 C19orf12Q9NSK7 152 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 TAS2R4Q9NYW5 299 aa12.82□□□□□ -0.36
HMGA1-206ENST00000478214 ANK2Q01484 3957 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 TRBV23-1A0A0A0MS06 115 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 IGHV1-69DA0A0B4J2H0 117 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 PNMA8CA0A1B0GUJ8 204 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 MYL12BO14950 172 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 ZNF737O75373 536 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 IGHV1-69P01742 117 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 TK1P04183 234 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 CDK1P06493 297 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 CD2P06729 351 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 MYF6P23409 242 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 DUSP1P28562 367 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 SNU13P55769 128 aaKnown RBP12.81□□□□□ -0.36
HMGA1-206ENST00000478214 KISS1Q15726 138 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 DEFB112Q30KQ8 113 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 ZNF529Q6P280 563 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 IZUMO2Q6UXV1 221 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 FAM185AQ8N0U4 392 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 ASCC1Q8N9N2 400 aaKnown RBP12.81□□□□□ -0.36
HMGA1-206ENST00000478214 OR4M1Q8NGD0 313 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 ZFAND2BQ8WV99 257 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 SGCDQ92629 289 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 TMEM106AQ96A25 262 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 ORAI1Q96D31 301 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 C1orf147Q96MC9 270 aaPredicted RBP12.81□□□□□ -0.36
HMGA1-206ENST00000478214 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
HMGA1-206ENST00000478214 TMEM82A0PJX8 343 aa12.8□□□□□ -0.36
HMGA1-206ENST00000478214 TRIM77I1YAP6 450 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms