RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 HTR1FP30939 366 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 KIR3DL2P43630 455 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 NPBWR2P48146 333 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 NANOS3P60323 173 aaKnown RBP5.66□□□□□ -1.5
HDAC3-207ENST00000475549 BLCAPP62952 87 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF85Q03923 595 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 C2orf68Q2NKX9 166 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 BEAN1Q3B7T3 259 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 PLA1AQ53H76 456 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 UTF1Q5T230 341 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 KPRPQ5T749 579 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-207ENST00000475549 BAIAP2L2Q6UXY1 529 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 SLC25A26Q70HW3 274 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 TMEM219Q86XT9 240 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 LYG1Q8N1E2 194 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 KLHDC1Q8N7A1 406 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 TPRX1Q8N7U7 411 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 YIPF7Q8N8F6 280 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 SLAMF9Q96A28 289 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 EME1Q96AY2 570 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 ADAT3Q96EY9 351 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-207ENST00000475549 OCSTAMPQ9BR26 566 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 GABARAPL1Q9H0R8 117 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 MOB1AQ9H8S9 216 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 KRT84Q9NSB2 600 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 RBFOX1Q9NWB1 397 aaKnown RBP5.66□□□□□ -1.5
HDAC3-207ENST00000475549 USE1Q9NZ43 259 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 WARS2Q9UGM6 360 aaKnown RBP5.66□□□□□ -1.5
HDAC3-207ENST00000475549 TCF19Q9Y242 345 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 POLDIP2Q9Y2S7 368 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 AP4S1Q9Y587 144 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 IGKV1-12A0A0C4DH73 117 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 A6NDX4 124 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 FAM90A22PA8MWA6 464 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 E9PQ18 207 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 SYT7O43581 403 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 SULT1C4O75897 302 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 IGKV1D-12P01611 117 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 IGHA1P01876 353 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 ARG1P05089 322 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 KRT8P05787 483 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 CHRM2P08172 466 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 OR2T7P0C7T2 308 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 IGHV1-8P0DP01 117 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 VSIG10L2P0DP72 767 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 CD28P10747 220 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 FASP25445 335 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 DUSP1P28562 367 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 ACTR3P61158 418 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 SSX2Q16385 188 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 TP53I3Q53FA7 332 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 FBLN7Q53RD9 439 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 SAMD5Q5TGI4 173 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF626Q68DY1 528 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 Q6ZTK2 550 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 ZDHHC13Q8IUH4 622 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 EGFL6Q8IUX8 553 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 ASCC1Q8N9N2 400 aaKnown RBP5.65□□□□□ -1.5
HDAC3-207ENST00000475549 OR4S1Q8NGB4 309 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 OR4C13Q8NGP0 309 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 MALSU1Q96EH3 234 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 CEP19Q96LK0 163 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 OSBPL10Q9BXB5 764 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 CDCA4Q9BXL8 241 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 GABARAPL3Q9BY60 117 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 NPFFR1Q9GZQ6 430 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 CHST5Q9GZS9 411 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 WNT10AQ9GZT5 417 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 RANBP3Q9H6Z4 567 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-207ENST00000475549 SEBOXQ9HB31 216 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-207ENST00000475549 FRRS1LQ9P0K9 344 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 AASSQ9UDR5 926 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 OAZ3Q9UMX2 235 aa5.65□□□□□ -1.5
HDAC3-207ENST00000475549 hCG_1809904A0A1W2PP81 198 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 A0A1W2PPE2 198 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 A0A1W2PPH5 198 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 A0A1W2PR64 198 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 A0A1W2PRV1 198 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 ENTPD6O75354 484 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 HAND1O96004 215 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 RBP4P02753 201 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 BCL3P20749 454 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 GDNFP39905 211 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 FUT6P51993 359 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 LGALS4P56470 323 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 EDDM3BP56851 147 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OR12D2P58182 307 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 ACTA2P62736 377 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 ACTG2P63267 376 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 ACTC1P68032 377 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 ACTA1P68133 377 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF91Q05481 1191 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF146Q15072 292 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 FAM189A2Q15884 450 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 OXLD1Q5BKU9 147 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 TCTEX1D4Q5JR98 221 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 C11orf88Q6PI97 169 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 Q6ZPA2 131 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 LIAT1Q6ZQX7 453 aa5.64□□□□□ -1.51
HDAC3-207ENST00000475549 GDPD3Q7L5L3 318 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms