RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CENPMQ9NSP4 180 aa7.06□□□□□ -1.28
CCDC93-208ENST00000474546 ANXA10Q9UJ72 324 aa7.06□□□□□ -1.28
CCDC93-208ENST00000474546 NOTCH4Q99466 2003 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 TRBV24-1A0A075B6N3 115 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A10PA6NDY2 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A18PA6NE21 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A16PA6NEW6 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A20PA6NIJ5 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A8PA6NJQ4 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A7PA6NKC0 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A22PA8MWA6 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A12PA8MX19 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A5PA8MXJ8 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 CDRT15L2A8MXV6 281 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A23PA8MXZ1 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 AGPAT2O15120 278 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 SLC31A1O15431 190 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 F12P00748 615 aaPredicted RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 CTXN2P0C2S0 81 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A15PP0C7V4 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A13PP0C7W8 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A14PP0C7W9 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FAM90A24PP0C7X0 464 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 LIPCP11150 499 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 SLC25A6P12236 298 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 BLVRBP30043 206 aaPredicted RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 DDTP30046 118 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 CCKARP32238 428 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 MPLP40238 635 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 VIPR2P41587 438 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 OR1D4P47884 311 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 CCR5P51681 352 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 RND2P52198 227 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 CLRN1P58418 232 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 OR2B8PP59922 312 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 RND3P61587 244 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 VAMP2P63027 116 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 MRPS21P82921 87 aaKnown RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 HHEXQ03014 270 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 FZD2Q14332 565 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF674Q2M3X9 581 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 ACER2Q5QJU3 275 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 CBLN3Q6UW01 205 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 DGAT2L6Q6ZPD8 337 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 PRSS41Q7RTY9 318 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 ABHD12BQ7Z5M8 362 aaPredicted RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 WDR5BQ86VZ2 330 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 UEVLDQ8IX04 471 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 H1FOOQ8IZA3 346 aaPredicted RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 HSD17B11Q8NBQ5 300 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 SEMA6DQ8NFY4 1073 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 OR51F2Q8NH61 342 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 OR6X1Q8NH79 312 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 SSC4DQ8WTU2 575 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 HAS2Q92819 552 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 SLAMF9Q96A28 289 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 ADIPOR1Q96A54 375 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 RCC1LQ96I51 464 aaKnown RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 YPEL4Q96NS1 127 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 LRRC3BQ96PB8 259 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 PSMG3-AS1Q96PY0 264 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 ADOQ96SZ5 270 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 PIGQQ9BRB3 760 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 PECRQ9BY49 303 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 BCL2L14Q9BZR8 327 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 METTL9Q9H1A3 318 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 NXF5Q9H1B4 397 aaKnown RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 KCNK15Q9H427 330 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF286AQ9HBT8 521 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 PLEKHJ1Q9NW61 149 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 WSB2Q9NYS7 404 aaPredicted RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 DOK5Q9P104 306 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 MRPS17Q9Y2R5 130 aaKnown RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 LSM5Q9Y4Y9 91 aaKnown RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 MMP24Q9Y5R2 645 aa7.05□□□□□ -1.28
CCDC93-208ENST00000474546 SPTBN1Q01082 2364 aaKnown RBP7.05□□□□□ -1.28
CCDC93-208ENST00000474546 IGKV3D-11A0A0A0MRZ8 115 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 FOXI3A8MTJ6 420 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 H3BQ15 152 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 SIGLEC5O15389 551 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 RAD51DO75771 328 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 DHRS3O75911 302 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 PIAS2O75928 621 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 VAMP5O95183 116 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 CYB5R3P00387 301 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 KNG1P01042 644 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 IFNA5P01569 189 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 CLPSP04118 112 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 HEXBP07686 556 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 CTSEP14091 401 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 NME1P15531 152 aaKnown RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 WASP42768 502 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 KIR2DL1P43626 348 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 CAPZBP47756 277 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 FASLGP48023 281 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 DHPSP49366 369 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF41P51814 821 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 HERV-K104P61576 105 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms