RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 EFCAB10A6NFE3 127 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 H0YJX3 145 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 SLC1A7O00341 560 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 SPRY1O43609 319 aaPredicted RBP7.53□□□□□ -1.2
SYN3-211ENST00000472027 ALX3O95076 343 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 CYB5AP00167 134 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 LALBAP00709 142 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 IGHV1-69P01742 117 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 TK1P04183 234 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 CHRM2P08172 466 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 PIPP12273 146 aaPredicted RBP7.53□□□□□ -1.2
SYN3-211ENST00000472027 BCL3P20749 454 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 NPBWR2P48146 333 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 SOX2P48431 317 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 POU3F4P49335 361 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 UBA52P62987 128 aaKnown RBP7.53□□□□□ -1.2
SYN3-211ENST00000472027 COL10A1Q03692 680 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 PDZK1IP1Q13113 114 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 BAMBIQ13145 260 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 CDK5R1Q15078 307 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 DEFB112Q30KQ8 113 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 RUSC1-AS1Q66K80 236 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 C1orf122Q6ZSJ8 110 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 RNF144BQ7Z419 303 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 CMTM4Q8IZR5 234 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 STX19Q8N4C7 294 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 PARP16Q8N5Y8 322 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 Q8N7P7 452 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 OR5D14Q8NGL3 314 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 OR13C9Q8NGT0 318 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 OR52N1Q8NH53 320 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 RPS4Y2Q8TD47 263 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 TSEN15Q8WW01 171 aaKnown RBP7.53□□□□□ -1.2
SYN3-211ENST00000472027 RFT1Q96AA3 541 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 C1orf147Q96MC9 270 aaPredicted RBP7.53□□□□□ -1.2
SYN3-211ENST00000472027 SPACA5Q96QH8 159 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 NEK6Q9HC98 313 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 CNOT2Q9NZN8 540 aaKnown RBP7.53□□□□□ -1.2
SYN3-211ENST00000472027 PSORS1C1Q9UIG5 152 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 DNHD1Q96M86 4753 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 TRBV23-1A0A0A0MS06 115 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 IGKV1-12A0A0C4DH73 117 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 K7N7A8 449 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 M0R1W7 72 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 SULT1B1O43704 296 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 ANGPTL7O43827 346 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 IGKV1D-12P01611 117 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 HCKP08631 526 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 CALCBP10092 127 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 PRTN3P24158 256 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 C21orf33P30042 268 aaPredicted RBP7.52□□□□□ -1.21
SYN3-211ENST00000472027 AQP4P55087 323 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 DLX1P56177 255 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 PRB3Q04118 309 aaPredicted RBP7.52□□□□□ -1.21
SYN3-211ENST00000472027 BLMHQ13867 455 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 KISS1Q15726 138 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 C6orf141Q5SZD1 244 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 CRIP3Q6Q6R5 217 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 METAP1DQ6UB28 335 aaPredicted RBP7.52□□□□□ -1.21
SYN3-211ENST00000472027 AHSA2Q719I0 299 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 PDZD9Q8IXQ8 264 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 Q8IYB0 196 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 FAM185AQ8N0U4 392 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 FAM58AQ8N1B3 248 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 KIR3DL3Q8N743 410 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 ZNF485Q8NCK3 441 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 OR4M1Q8NGD0 313 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 GPR148Q8TDV2 347 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 RGP1Q92546 391 aaPredicted RBP7.52□□□□□ -1.21
SYN3-211ENST00000472027 EMG1Q92979 244 aaKnown RBP7.52□□□□□ -1.21
SYN3-211ENST00000472027 ZDHHC16Q969W1 377 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 SMIM19Q96E16 107 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 DUX5Q96PT3 197 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 FAM234AQ9H0X4 552 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 PRDM13Q9H4Q3 707 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 SIRT7Q9NRC8 400 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 C19orf12Q9NSK7 152 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 RBFOX1Q9NWB1 397 aaKnown RBP7.52□□□□□ -1.21
SYN3-211ENST00000472027 ZNF281Q9Y2X9 895 aa7.52□□□□□ -1.21
SYN3-211ENST00000472027 JMJD1CQ15652 2540 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 TMEM89A2RUT3 159 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 DNAJC9-AS1A6NH13 148 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 H0YHG0 523 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 RNASEK-C17orf49H0YIS7 233 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 MAGEB3O15480 346 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 ZNF737O75373 536 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 KDM4BO94953 1096 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 HAND1O96004 215 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 PRKACAP17612 351 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 RAB3AP20336 220 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 DUSP1P28562 367 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 RPL31P62899 125 aaKnown RBP7.51□□□□□ -1.21
SYN3-211ENST00000472027 ACTG1P63261 375 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 SLC9A3R2Q15599 337 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 TMEM200BQ69YZ2 307 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 DMKNQ6E0U4 476 aaPredicted RBP7.51□□□□□ -1.21
SYN3-211ENST00000472027 ASPHD2Q6ICH7 369 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 ZNF529Q6P280 563 aa7.51□□□□□ -1.21
SYN3-211ENST00000472027 FIP1L1Q6UN15 594 aaKnown RBP7.51□□□□□ -1.21
SYN3-211ENST00000472027 Q6YL49 198 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms