RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 OR13G1Q8NGZ3 307 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 CHAC2Q8WUX2 184 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 TMEM171Q8WVE6 324 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 PPP1R14BQ96C90 147 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 LRRC46Q96FV0 321 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 CACNG6Q9BXT2 260 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 TLNRD1Q9H1K6 362 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 CXXC4Q9H2H0 198 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 ZNF442Q9H7R0 627 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 NPDC1Q9NQX5 325 aaPredicted RBP7.99□□□□□ -1.13
VPS52-216ENST00000471309 NUDT15Q9NV35 164 aa7.99□□□□□ -1.13
VPS52-216ENST00000471309 A0A1B0GUH1 482 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A27PA6NNH2 459 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 ZNF736B4DX44 427 aaPredicted RBP7.98□□□□□ -1.13
VPS52-216ENST00000471309 INMT-MINDY4F8WBC2 141 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 H0YL77 283 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 PDCD6O75340 191 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 NDUFB6O95139 128 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 RAB3DO95716 219 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 ACAA1P09110 424 aaPredicted RBP7.98□□□□□ -1.13
VPS52-216ENST00000471309 CD200P41217 278 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 ERVK11-1P61568 191 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 BSPH1Q075Z2 132 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 ARFRP1Q13795 201 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 IL13RA2Q14627 380 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 ZMYND11Q15326 602 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 TATDN3Q17R31 274 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 MSMPQ1L6U9 139 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 ACTBL2Q562R1 376 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 AGAP6Q5VW22 663 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 FAAP20Q6NZ36 180 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 ZGRF1Q86YA3 2104 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 SCCPDHQ8NBX0 429 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 OR10AD1Q8NGE0 317 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 OR56B4Q8NH76 319 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 LILRB4Q8NHJ6 448 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 EMG1Q92979 244 aaKnown RBP7.98□□□□□ -1.13
VPS52-216ENST00000471309 RADILQ96JH8 1075 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 NRIP2Q9BQI9 281 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 OCSTAMPQ9BR26 566 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 C20orf85Q9H1P6 137 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 PLEKHJ1Q9NW61 149 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 MCUBQ9NWR8 336 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 RCC2Q9P258 522 aaKnown RBP7.98□□□□□ -1.13
VPS52-216ENST00000471309 FZR1Q9UM11 496 aa7.98□□□□□ -1.13
VPS52-216ENST00000471309 TLN1Q9Y490 2541 aaKnown RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 RTTNQ86VV8 2226 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 PLSCR5A0PG75 271 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 C7orf66A4D0T2 115 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 DPRXA6NFQ7 191 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 F8VVB4 439 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 F8VWA3 439 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 ABCD4O14678 606 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 NOS1APO75052 506 aaPredicted RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 RHBDL1O75783 438 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 OR7C1O76099 320 aaPredicted RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 PTBP3O95758 552 aaKnown RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 DHFRP00374 187 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 TRAPPC2P0DI81 140 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 TRAPPC2BP0DI82 140 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 PGA5P0DJD9 388 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 PRKACAP17612 351 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 FUT3P21217 361 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 DTYMKP23919 212 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 HLA-DMAP28067 261 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 MECP2P51608 486 aaKnown RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 RBMS2Q15434 407 aaKnown RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 RNASE10Q5GAN6 216 aaKnown RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 SFRP4Q6FHJ7 346 aaPredicted RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 ZNF782Q6ZMW2 699 aaPredicted RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 HOGA1Q86XE5 327 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 FAM58AQ8N1B3 248 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 GVQW1Q8N7I0 195 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 POC1AQ8NBT0 407 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 OR4D10Q8NGI6 311 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 SNAPC3Q92966 411 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 FBXW5Q969U6 566 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 MRPL24Q96A35 216 aaKnown RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 WFIKKN1Q96NZ8 548 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 SULT4A1Q9BR01 284 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 CHST6Q9GZX3 395 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 ESRP2Q9H6T0 727 aaKnown RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 IFT22Q9H7X7 185 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 SPACA1Q9HBV2 294 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 MSL2Q9HCI7 577 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 CA10Q9NS85 328 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 SLC2A8Q9NY64 477 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 ZNF581Q9P0T4 197 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 DUSP13Q9UII6 198 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 AK3Q9UIJ7 227 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 ERRFI1Q9UJM3 462 aaPredicted RBP7.97□□□□□ -1.13
VPS52-216ENST00000471309 PLEKHA6Q9Y2H5 1048 aa7.97□□□□□ -1.13
VPS52-216ENST00000471309 SETXQ7Z333 2677 aaKnown RBP7.96□□□□□ -1.13
VPS52-216ENST00000471309 MYO7BQ6PIF6 2116 aa7.96□□□□□ -1.13
VPS52-216ENST00000471309 TRAV6A0A075B6T7 132 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 ZSCAN5BA6NJL1 495 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 DISC1C4P0D8 188 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 F5H5P2 479 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms