RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 HBE1P02100 147 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ZNF20P17024 532 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 DTYMKP23919 212 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 PTGER4P35408 488 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 GPR1P46091 355 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 RABIFP47224 123 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 FLT3LGP49771 235 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 FGF8P55075 233 aaPredicted RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 SNU13P55769 128 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 KRTDAPP60985 99 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 TRA2BP62995 288 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 ZP2Q05996 745 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 RTP5Q14D33 572 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ABCA11PQ4W5N1 156 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 FBLN7Q53RD9 439 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 DMRTC1Q5HYR2 192 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CDCP2Q5VXM1 449 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ASPHD2Q6ICH7 369 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 FAM166AQ6J272 317 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CALHM1Q8IU99 346 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 APOBEC3FQ8IUX4 373 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 LRRC25Q8N386 305 aaPredicted RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 OR13G1Q8NGZ3 307 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CMTM2Q8TAZ6 248 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ADAMTS18Q8TE60 1221 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 TMEM170AQ8WVE7 144 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 FGGYQ96C11 551 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 GPER1Q99527 375 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 TBL1XR1Q9BZK7 514 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 MAP1LC3BQ9GZQ8 125 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 PCBD2Q9H0N5 130 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CENPMQ9NSP4 180 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 IL19Q9UHD0 177 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ADAM29Q9UKF5 820 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 EMC9Q9Y3B6 208 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 NLRC5Q86WI3 1866 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ARHGAP21Q5T5U3 1957 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 LOC105371242A0A075B767 164 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 A0A1B0GW64 132 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 GRIFINA4D1Z8 144 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 WIPF3A6NGB9 483 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 GPR89AB7ZAQ6 455 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 SOCS1O15524 211 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 LDB3O75112 727 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 LYPD3O95274 346 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 HPNP05981 417 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 ASGR1P07306 291 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 GPR89BP0CG08 455 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 HOXC12P31275 282 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 BMI1P35226 326 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 SFTPDP35247 375 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 RAB38P57729 211 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 FAM3BP58499 235 aaPredicted RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 FXYD4P59646 89 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 UBE2G2P60604 165 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 SUMO1P63165 101 aaKnown RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 SLC17A1Q14916 467 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 EXOSC7Q15024 291 aaKnown RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 ZNF506Q5JVG8 444 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 PRR27Q6MZM9 219 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 MEX3BQ6ZN04 569 aaKnown RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 ZAR1Q86SH2 424 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 MRPL52Q86TS9 123 aaKnown RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 CDC20BQ86Y33 519 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 CMTM8Q8IZV2 173 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 LGI3Q8N145 548 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 ARL14EPQ8N8R7 260 aaPredicted RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 MFSD9Q8NBP5 474 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 OR5L1Q8NGL2 311 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 PTPMT1Q8WUK0 201 aaPredicted RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 ORAOV1Q8WV07 137 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 BCL2L2Q92843 193 aaPredicted RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 EMG1Q92979 244 aaKnown RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 RSPRY1Q96DX4 576 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 RBMXL1Q96E39 390 aaKnown RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 ALG14Q96F25 216 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 PSMG3-AS1Q96PY0 264 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 C20orf144Q9BQM9 153 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 HSPB9Q9BQS6 159 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 FAM103A1Q9BTL3 118 aaKnown RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 ZNF665Q9H7R5 613 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 ELL3Q9HB65 397 aaPredicted RBP3.71□□□□□ -1.81
VPS50-210ENST00000471188 GPR35Q9HC97 309 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 OSGIN2Q9Y236 505 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 LAMTOR2Q9Y2Q5 125 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 TRAPPC1Q9Y5R8 145 aa3.71□□□□□ -1.81
VPS50-210ENST00000471188 MYOFQ9NZM1 2061 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 A0A0U1RQK1 487 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 LOC107986453A0A1B0GWG9 222 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 K7EP13 123 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 P2RY10O00398 339 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ARPC3O15145 178 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 CLEC3AO75596 197 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 NXPH3O95157 252 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 NDUFB8O95169 186 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ZNF205O95201 554 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ONECUT2O95948 504 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PDGFBP01127 241 aaPredicted RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 HLA-HP01893 362 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 GZMHP20718 246 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms