RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 EFCAB10A6NFE3 127 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 OGG1O15527 345 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 MYL12AP19105 171 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 CEBPDP49716 269 aaPredicted RBP11.63□□□□□ -0.55
TOP3B-215ENST00000470338 UBA52P62987 128 aaKnown RBP11.63□□□□□ -0.55
TOP3B-215ENST00000470338 ST3GAL4Q11206 333 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 PDZK1IP1Q13113 114 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 CRIP3Q6Q6R5 217 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 VMO1Q7Z5L0 202 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 SERPINA12Q8IW75 414 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 Q8IYB0 196 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 CMTM4Q8IZR5 234 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 ZNF485Q8NCK3 441 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 OR5D14Q8NGL3 314 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 OR13C9Q8NGT0 318 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 OR52N1Q8NH53 320 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 GATAD2BQ8WXI9 593 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 RGP1Q92546 391 aaPredicted RBP11.63□□□□□ -0.55
TOP3B-215ENST00000470338 LHX4Q969G2 390 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 UNKLQ9H9P5 680 aaKnown RBP11.63□□□□□ -0.55
TOP3B-215ENST00000470338 ELL3Q9HB65 397 aaPredicted RBP11.63□□□□□ -0.55
TOP3B-215ENST00000470338 OR14J1Q9UGF5 321 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 PSORS1C1Q9UIG5 152 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 SIRT4Q9Y6E7 314 aaPredicted RBP11.63□□□□□ -0.55
TOP3B-215ENST00000470338 IGHV1-69DA0A0B4J2H0 117 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 ERICH4A6NGS2 130 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 CLDN34H7C241 214 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 M0R1W7 72 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 XPNPEP2O43895 674 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 LALBAP00709 142 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 TK1P04183 234 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 PRTN3P24158 256 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 NPBWR2P48146 333 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 CAPZA1P52907 286 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 BAMBIQ13145 260 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 MED21Q13503 144 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 DEFB112Q30KQ8 113 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 RUSC1-AS1Q66K80 236 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 ZNF529Q6P280 563 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 RNF144BQ7Z419 303 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 FAM234AQ9H0X4 552 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 ZMAT3Q9HA38 289 aaKnown RBP11.62□□□□□ -0.55
TOP3B-215ENST00000470338 CHCHD3Q9NX63 227 aaKnown RBP11.62□□□□□ -0.55
TOP3B-215ENST00000470338 DHDHQ9UQ10 334 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 ANK2Q01484 3957 aa11.62□□□□□ -0.55
TOP3B-215ENST00000470338 A0A1W2PQ09 198 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 DNAJC9-AS1A6NH13 148 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 K7N7A8 449 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 SPRY1O43609 319 aaPredicted RBP11.61□□□□□ -0.55
TOP3B-215ENST00000470338 SULT1B1O43704 296 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 ZNF737O75373 536 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 INMTO95050 263 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 CYB5AP00167 134 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 CHRM2P08172 466 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 BCL3P20749 454 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 POU3F4P49335 361 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 COL10A1Q03692 680 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 DMKNQ6E0U4 476 aaPredicted RBP11.61□□□□□ -0.55
TOP3B-215ENST00000470338 SAXO1Q8IYX7 474 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 TSEN15Q8WW01 171 aaKnown RBP11.61□□□□□ -0.55
TOP3B-215ENST00000470338 TNFRSF14Q92956 283 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 SPACA5Q96QH8 159 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 NEK6Q9HC98 313 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 NOX4Q9NPH5 578 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 C19orf12Q9NSK7 152 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 FKBP14Q9NWM8 211 aa11.61□□□□□ -0.55
TOP3B-215ENST00000470338 IGKV1-12A0A0C4DH73 117 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 MDFIC2A0A1B0GVS7 189 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 TMEM89A2RUT3 159 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 RNASEK-C17orf49H0YIS7 233 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 KDM4BO94953 1096 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 IGKV1D-12P01611 117 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 RNASE1P07998 156 aaKnown RBP11.6□□□□□ -0.55
TOP3B-215ENST00000470338 OCM2P0CE71 109 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 OCMP0CE72 109 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-215ENST00000470338 COMPP49747 757 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-215ENST00000470338 AQP4P55087 323 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 RPL31P62899 125 aaKnown RBP11.6□□□□□ -0.55
TOP3B-215ENST00000470338 ZNF146Q15072 292 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 SLC9A3R2Q15599 337 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 KISS1Q15726 138 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 TMEM200BQ69YZ2 307 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 ASPHD2Q6ICH7 369 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 Q6YL49 198 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 BPIFB6Q8NFQ5 453 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 TBC1D15Q8TC07 691 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 EMG1Q92979 244 aaKnown RBP11.6□□□□□ -0.55
TOP3B-215ENST00000470338 RFT1Q96AA3 541 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 SMIM19Q96E16 107 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 METTL8Q9H825 291 aaKnown RBP11.6□□□□□ -0.55
TOP3B-215ENST00000470338 RHOFQ9HBH0 211 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 SIRT7Q9NRC8 400 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 RBFOX1Q9NWB1 397 aaKnown RBP11.6□□□□□ -0.55
TOP3B-215ENST00000470338 ZNF281Q9Y2X9 895 aa11.6□□□□□ -0.55
TOP3B-215ENST00000470338 ANGPTL7O43827 346 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 CD2P06729 351 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms