RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 PRKNO60260 465 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-205ENST00000469550 TSPAN2O60636 221 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 RAD51DO75771 328 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 MPIG6BO95866 241 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 IFNA21P01568 189 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 IGKV3-11P04433 115 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF20P17024 532 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 PI3P19957 117 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 GPR157Q5UAW9 335 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 RTL6Q6ICC9 239 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 RPUSD3Q6P087 351 aaKnown RBP8.38□□□□□ -1.07
HDAC3-205ENST00000469550 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 RTN4RL2Q86UN3 420 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 LINC00346Q8IVM7 164 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 OR5AS1Q8N127 324 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 LRRC18Q8N456 261 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF565Q8N9K5 539 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 SLC25A43Q8WUT9 341 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-205ENST00000469550 SLAMF6Q96DU3 332 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 GNRHR2Q96P88 292 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 RSRP1Q9BUV0 290 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 DECR2Q9NUI1 292 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 TMED3Q9Y3Q3 217 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 MMACHCQ9Y4U1 282 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 SHANK1Q9Y566 2161 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 NBASA2RRP1 2371 aa8.38□□□□□ -1.07
HDAC3-205ENST00000469550 TRBV23-1A0A0A0MS06 115 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 FOXI3A8MTJ6 420 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 E5RGE8 158 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 MS4A18H0YCH9 400 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF354AO60765 605 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 SCRG1O75711 98 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 CTSDP07339 412 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 IL12BP29460 328 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 ALDH3B1P43353 468 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 P2RY1P47900 373 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 ARL4DP49703 201 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 CD81P60033 236 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 ARFRP1Q13795 201 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 CLINT1Q14677 625 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 MS4A18Q3C1V0 323 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 FAM219AQ8IW50 185 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 GPR119Q8TDV5 335 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 TCTN2Q96GX1 697 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 ARHGAP5-AS1Q96IT6 56 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 C5orf34Q96MH7 638 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 CHST5Q9GZS9 411 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 EIF5A2Q9GZV4 153 aaKnown RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 AKIRIN1Q9H9L7 192 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 BCO1Q9HAY6 547 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 C19orf12Q9NSK7 152 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 PARPBPQ9NWS1 579 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 NSG2Q9Y328 171 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 HDGFL3Q9Y3E1 203 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 USP9YO00507 2555 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 NPIPA5E9PKD4 350 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 NUDT14O95848 222 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 PTGER4P35408 488 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 GPX4P36969 197 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 CAMLGP49069 296 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 SNU13P55769 128 aaKnown RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 OR2B8PP59922 312 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 CSNK2A1P68400 391 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 SLC35A1P78382 337 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 TMEM151BQ8IW70 566 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 SGPP2Q8IWX5 399 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF321PQ8N8H1 164 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 CSNK2A3Q8NEV1 391 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 OR8G5Q8NG78 346 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 OR10H5Q8NGA6 315 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 SSC4DQ8WTU2 575 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 MMABQ96EY8 250 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 TBL1XR1Q9BZK7 514 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 OR10A2Q9H208 303 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 UNKLQ9H9P5 680 aaKnown RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 EHFQ9NZC4 300 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 KLHL13Q9P2N7 655 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 TCFL5Q9UL49 500 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 NPIPA1Q9UND3 350 aa8.37□□□□□ -1.07
HDAC3-205ENST00000469550 USP9XQ93008 2570 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-205ENST00000469550 A0A087WWC5 75 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 SERPINE3A8MV23 424 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 MASP2O00187 686 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 GPR137BO60478 399 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 OR2C1O95371 312 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 ARG1P05089 322 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 KLK3P07288 261 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-205ENST00000469550 HLA-DOBP13765 273 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 DAOP14920 347 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 CCL1P22362 96 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 S100A2P29034 98 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 RPS23P62266 143 aaKnown RBP8.36□□□□□ -1.07
HDAC3-205ENST00000469550 RPS18P62269 152 aaKnown RBP8.36□□□□□ -1.07
HDAC3-205ENST00000469550 DEFA6Q01524 100 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 FMODQ06828 376 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 KIAA0141Q14154 515 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-205ENST00000469550 H1FNTQ75WM6 255 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-205ENST00000469550 SLC38A9Q8NBW4 561 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 OR10S1Q8NGN2 331 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 MFSD8Q8NHS3 518 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms