RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 C1orf54Q8WWF1 131 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 CHCHD10Q8WYQ3 142 aaPredicted RBP2.04□□□□□ -2.08
XRN1-206ENST00000467077 ST8SIA1Q92185 356 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 CMTM7Q96FZ5 175 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 TMEM101Q96IK0 257 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 SERPINB12Q96P63 405 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 ARHGDIGQ99819 225 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 CENPKQ9BS16 269 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 EFCAB11Q9BUY7 163 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 C1QTNF6Q9BXI9 259 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 CAPS2Q9BXY5 557 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 MS4A8Q9BY19 250 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 BPESC1Q9GZL8 116 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 CDC42EP4Q9H3Q1 356 aaKnown RBP2.04□□□□□ -2.08
XRN1-206ENST00000467077 DSN1Q9H410 356 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 GORASP2Q9H8Y8 452 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 SDHAF3Q9NRP4 125 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 GLRX2Q9NS18 164 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 UFSP2Q9NUQ7 469 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 LYARQ9NX58 379 aaKnown RBP2.04□□□□□ -2.08
XRN1-206ENST00000467077 MED29Q9NX70 200 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 PAQR5Q9NXK6 330 aaPredicted RBP2.04□□□□□ -2.08
XRN1-206ENST00000467077 MED11Q9P086 117 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 TIMM10BQ9Y5J6 103 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 CMYA5Q8N3K9 4069 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 NBEAL2Q6ZNJ1 2754 aa2.04□□□□□ -2.08
XRN1-206ENST00000467077 ARFGEF3Q5TH69 2177 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 PRR14LQ5THK1 2151 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 CIB4A0PJX0 185 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 PLPP1O14494 284 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 SNNO75324 88 aaPredicted RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 SUPT7LO94864 414 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 SNAPINO95295 136 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 CLDN9O95484 217 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 LGI1O95970 557 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ERCC1P07992 297 aaPredicted RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 TACSTD2P09758 323 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 RBMY1CP0DJD4 496 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ZNF44P15621 663 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 COX5AP20674 150 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ME2P23368 584 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 GCAP28676 217 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 CD1BP29016 333 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 EVI2BP34910 448 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 PPICP45877 212 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 XKP51811 444 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ARFIP1P53367 373 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 APOC4P55056 127 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 CARD18P57730 90 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 RAB10P61026 200 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 UBA52P62987 128 aaKnown RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 MRPS22P82650 360 aaKnown RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 CDK16Q00536 496 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 IRF8Q02556 426 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 CHIT1Q13231 466 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ARL6IP1Q15041 203 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 NSUN5P1Q3KNT7 163 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 KLF17Q5JT82 389 aaPredicted RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 TIMM23BQ5SRD1 257 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 HBMQ6B0K9 141 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 OR52E8Q6IFG1 317 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 FAM45BPQ6NSW5 357 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 MED27Q6P2C8 311 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 C4orf22Q6V702 233 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 GALNT10Q86SR1 603 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 SLC35F2Q8IXU6 374 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 UBE2J2Q8N2K1 259 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ZCCHC7Q8N3Z6 543 aaKnown RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 ARL6IP6Q8N6S5 226 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 OR2M3Q8NG83 312 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 OR52R1Q8NGF1 315 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 OR52M1Q8NGK5 317 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 OR2V1Q8NHB1 315 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 FAM110BQ8TC76 370 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 FAM45AQ8TCE6 357 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ABHD3Q8WU67 409 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 C22orf15Q8WYQ4 148 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 UBE2E3Q969T4 207 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 EFHD2Q96C19 240 aaPredicted RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 HBEGFQ99075 208 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 SUCNR1Q9BXA5 334 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 FRMD8P1Q9BZ68 369 aaPredicted RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 RAB1BQ9H0U4 201 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 OR51B5Q9H339 312 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 NARFLQ9H6Q4 476 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 TMEM185BQ9H7F4 350 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 PATZ1Q9HBE1 687 aaKnown RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 MYOZ1Q9NP98 299 aaPredicted RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 SMPD3Q9NY59 655 aaPredicted RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 PRPF19Q9UMS4 504 aaKnown RBP2.03□□□□□ -2.08
XRN1-206ENST00000467077 CFL2Q9Y281 166 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 POLDIP2Q9Y2S7 368 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 ASB4Q9Y574 426 aa2.03□□□□□ -2.08
XRN1-206ENST00000467077 MGAM2Q2M2H8 2515 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 ALPK2Q86TB3 2170 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 IGKV1D-8A0A087WSZ0 117 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 A0A0A6YYD5 115 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 IGHV3-15A0A0B4J1V0 119 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 A0A0J9YW62 118 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 GOLGA8QA0A0J9YX86 632 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms