RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PLSCR4Q9NRQ2 329 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 IL36GQ9NZH8 169 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 NUP50Q9UKX7 468 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 MAP1BP46821 2468 aaKnown RBP15.69■□□□□ 0.1
COL9A3-205ENST00000466192 C9orf170A2RU37 121 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 MKRN2OSH3BPM6 223 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 LILRA1O75019 489 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 RTL6Q6ICC9 239 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 CCDC36Q8IYA8 594 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 ZDHHC23Q8IYP9 409 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 FBXL14Q8N1E6 418 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 BATF2Q8N1L9 274 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 OSR2Q8N2R0 312 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 ZNF611Q8N823 705 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 EMG1Q92979 244 aaKnown RBP15.69■□□□□ 0.1
COL9A3-205ENST00000466192 ELMOD3Q96FG2 381 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 EHFQ9NZC4 300 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 AUP1Q9Y679 476 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 MBD3L4A6NDZ8 208 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-205ENST00000466192 MBD3L3A6NE82 208 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-205ENST00000466192 MBD3L5A6NJ08 208 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-205ENST00000466192 MPC2O95563 127 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 CXCL2P19875 107 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 NFYAP23511 347 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-205ENST00000466192 TAS2R46P59540 309 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 DHODHQ02127 395 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 CEACAM21Q3KPI0 293 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 CHRFAM7AQ494W8 412 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 TOR2AQ5JU69 321 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 MBD3L2Q8NHZ7 208 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-205ENST00000466192 CASTOR1Q8WTX7 329 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 ABHD17AQ96GS6 310 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 ST3GAL6Q9Y274 331 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 PIEZO2Q9H5I5 2752 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 IGKV1D-8A0A087WSZ0 117 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 GPM6AP51674 278 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 SPATA46Q5T0L3 261 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 BRICD5Q6PL45 260 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 SLC25A26Q70HW3 274 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 ZNF680Q8NEM1 530 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 OR5AP2Q8NGF4 316 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 OR5L1Q8NGL2 311 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 STARD4Q96DR4 205 aa15.68■□□□□ 0.1
COL9A3-205ENST00000466192 CLEC4MQ9H2X3 399 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-205ENST00000466192 FXYD6-FXYD2A0A087WZ82 144 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 LINC00862A6NCI5 91 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 CCSO14618 274 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 ARPC5O15511 151 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 CA11O75493 328 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 RGS11O94810 467 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 CGAP01215 116 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 IL2RAP01589 272 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 CRYABP02511 175 aaKnown RBP15.67■□□□□ 0.1
COL9A3-205ENST00000466192 IL32P24001 234 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 BAMBIQ13145 260 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 PDCD1Q15116 288 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 PPA1Q15181 289 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 FAHD2BQ6P2I3 314 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-205ENST00000466192 INO80CQ6PI98 192 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-205ENST00000466192 ZNF610Q8N9Z0 462 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 OR10AD1Q8NGE0 317 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 OR13G1Q8NGZ3 307 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 FAHD2AQ96GK7 314 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 TMPRSS13Q9BYE2 586 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 FXYD6Q9H0Q3 95 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 OPN3Q9H1Y3 402 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-205ENST00000466192 C5orf66Q9H5L9 145 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 AK3Q9UIJ7 227 aa15.67■□□□□ 0.1
COL9A3-205ENST00000466192 PI3P19957 117 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 NPBWR2P48146 333 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 SEC61A1P61619 476 aaKnown RBP15.66■□□□□ 0.1
COL9A3-205ENST00000466192 TMEM17Q86X19 198 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 WDR31Q8NA23 367 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 ZSCAN4Q8NAM6 433 aaPredicted RBP15.66■□□□□ 0.1
COL9A3-205ENST00000466192 OR5M8Q8NGP6 311 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 MITD1Q8WV92 249 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 DYRK2Q92630 601 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 MRPS24Q96EL2 167 aaKnown RBP15.66■□□□□ 0.1
COL9A3-205ENST00000466192 BOD1Q96IK1 185 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 PHB2Q99623 299 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 SULT4A1Q9BR01 284 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 PPA2Q9H2U2 334 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 HSF4Q9ULV5 492 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 FAM215AQ9Y5M1 114 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 MCRIP1C9JLW8 97 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 L7N2F9 121 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 M0R233 179 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 MSTNO14793 375 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 SMPD2O60906 423 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 CHATP28329 748 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 HAAOP46952 286 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 SORDQ00796 357 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 AADACL3Q5VUY0 350 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 OR2T2Q6IF00 324 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 OVCH2Q7RTZ1 564 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 RPRMLQ8N4K4 120 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 C1orf162Q8NEQ5 155 aaPredicted RBP15.66■□□□□ 0.1
COL9A3-205ENST00000466192 C1QTNF6Q9BXI9 259 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 PROCRQ9UNN8 238 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 GPR132Q9UNW8 380 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms