RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CHID1Q9BWS9 393 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 MROQ9BYG7 248 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 GPR173Q9NS66 373 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
MCF2L-220ENST00000464800 hADV38S2A0JD32 116 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 DLGAP1O14490 977 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 GNGT2O14610 69 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 ZNF737O75373 536 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 HMGN1P05114 100 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 CHRM2P08172 466 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 EDDM3AQ14507 147 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 TMEM42Q69YG0 159 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 ZBTB49Q6ZSB9 765 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 OR51D1Q8NGF3 324 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 LRGUKQ96M69 825 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 SLC25A33Q9BSK2 321 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 PKIBQ9C010 78 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 YIPF3Q9GZM5 350 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 TMEM133Q9H2Q1 129 aa11.66□□□□□ -0.54
MCF2L-220ENST00000464800 NUFIP1Q9UHK0 495 aaKnown RBP11.66□□□□□ -0.54
MCF2L-220ENST00000464800 OSMP13725 252 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 SLC2A5P22732 501 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 HTR1DP28221 377 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 BRS3P32247 399 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 ARHGDIBP52566 201 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 CDK5Q00535 292 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 MFGE8Q08431 387 aaPredicted RBP11.65□□□□□ -0.54
MCF2L-220ENST00000464800 IL24Q13007 206 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 RNF144BQ7Z419 303 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 MRPL41Q8IXM3 137 aaKnown RBP11.65□□□□□ -0.54
MCF2L-220ENST00000464800 ADGRG5Q8IZF4 528 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 ASB9Q96DX5 294 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 ZNF649Q9BS31 505 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
MCF2L-220ENST00000464800 ZNF556Q9HAH1 456 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 DNAJB9Q9UBS3 223 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 GTF2A1LQ9UNN4 478 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 LINC00312Q9Y6C7 94 aa11.65□□□□□ -0.54
MCF2L-220ENST00000464800 ZNF254O75437 659 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 OR2F2O95006 317 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 TTRP02766 147 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 CCDC159P0C7I6 412 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 PRKACGP22612 351 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 CD24P25063 80 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 RIDAP52758 137 aaKnown RBP11.64□□□□□ -0.55
MCF2L-220ENST00000464800 CBX1P83916 185 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 ROM1Q03395 351 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 APOFQ13790 326 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 TMEM236Q5W0B7 351 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 ETV3LQ6ZN32 361 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 ANGPTL5Q86XS5 388 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 ZNF679Q8IYX0 411 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 OR4P4Q8NGL7 312 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 BCAS4Q8TDM0 211 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 STMN2Q93045 179 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 CCDC124Q96CT7 223 aaKnown RBP11.64□□□□□ -0.55
MCF2L-220ENST00000464800 SNX22Q96L94 193 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 CEP19Q96LK0 163 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 TTTY10Q9BZA0 68 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 MOB1AQ9H8S9 216 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 IKZF2Q9UKS7 526 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 U3KQK5 164 aa11.64□□□□□ -0.55
MCF2L-220ENST00000464800 PRR32B1ATL7 298 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 LOC110117498-PIK3R3F6TDL0 507 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 MRPL3P09001 348 aaKnown RBP11.63□□□□□ -0.55
MCF2L-220ENST00000464800 NHLRC4P0CG21 123 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-220ENST00000464800 BCL2L15Q5TBC7 163 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 UNQ9370/PRO34162Q6UXP9 181 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 TRAPPC6BQ86SZ2 158 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 HS3ST5Q8IZT8 346 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 OSR2Q8N2R0 312 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 TPRX1Q8N7U7 411 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 TRMT10AQ8TBZ6 339 aaKnown RBP11.63□□□□□ -0.55
MCF2L-220ENST00000464800 CANT1Q8WVQ1 401 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 ASB17Q8WXJ9 295 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 RBM14Q96PK6 669 aaKnown RBP11.63□□□□□ -0.55
MCF2L-220ENST00000464800 TEX12Q9BXU0 123 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 DPM3Q9P2X0 92 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 ZMAT5Q9UDW3 170 aaKnown RBP11.63□□□□□ -0.55
MCF2L-220ENST00000464800 V9GYS6 101 aa11.63□□□□□ -0.55
MCF2L-220ENST00000464800 DNAH9Q9NYC9 4486 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 FAM230AA0A1W2PPH8 454 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 TMEM82A0PJX8 343 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 PSMB11A5LHX3 300 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 A6NIN4 97 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 SH2D7A6NKC9 451 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-220ENST00000464800 DHRS7CA6NNS2 312 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 E2F6O75461 281 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 AMY1AP04745 511 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 AMY2AP04746 511 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 T-ENOLP0DO92 83 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 CALB2P22676 271 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 LMO1P25800 156 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 PEX2P28328 305 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 THBS3P49746 956 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 GRK1Q15835 563 aa11.62□□□□□ -0.55
MCF2L-220ENST00000464800 SNAPC1Q16533 368 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms