RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MXRA5Q9NR99 2828 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 IGHV2-70DA0A0C4DH43 119 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 KIR2DS1A0A191URI9 304 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 GPR37O15354 613 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 SIGLEC5O15389 551 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 ANGPTL7O43827 346 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 GPX5O75715 221 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 ECDO95905 644 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 KNG1P01042 644 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 AVPP01185 164 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 TMEM225BP0DP42 221 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 IGFBP3P17936 291 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 BCL3P20749 454 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 TGFBR2P37173 567 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 NPBWR2P48146 333 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 PAX8Q06710 450 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 MLLT11Q13015 90 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 TPBGQ13641 420 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 TBCEQ15813 527 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 DGUOKQ16854 277 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 C11orf91Q3C1V1 193 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 LIPKQ5VXJ0 399 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 C1orf229Q6ZS94 237 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 BTN2A1Q7KYR7 527 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 SAXO1Q8IYX7 474 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 ZSCAN4Q8NAM6 433 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 OR52N4Q8NGI2 321 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 THRSPQ92748 146 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 EMG1Q92979 244 aaKnown RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 DACT3Q96B18 629 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 SDSLQ96GA7 329 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 DERL3Q96Q80 235 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 GPER1Q99527 375 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 MGLLQ99685 303 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 NUDT16L1Q9BRJ7 211 aaKnown RBP12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 TMED9Q9BVK6 235 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 ACOT13Q9NPJ3 140 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 OR14J1Q9UGF5 321 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 LRRC42Q9Y546 428 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 MAB21L2Q9Y586 359 aa12.04□□□□□ -0.48
SQSTM1-205ENST00000464493 IGKV1-12A0A0C4DH73 117 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 C22orf46C9J442 243 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 ENSAO43768 121 aaKnown RBP12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 IGKV1D-12P01611 117 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 FAM157CP0CG43 387 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 SELLP14151 372 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 CPEP16870 476 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 SRD5A1P18405 259 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 MAPK3P27361 379 aaPredicted RBP12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 BDKRB2P30411 391 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 SRP14P37108 136 aaKnown RBP12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 ZP1P60852 638 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 EMX1Q04741 257 aaPredicted RBP12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 ACSM3Q53FZ2 586 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 UNQ9370/PRO34162Q6UXP9 181 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 FAM58AQ8N1B3 248 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 FGFRL1Q8N441 504 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 ZNF561Q8N587 486 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 CD177Q8N6Q3 437 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 ZNRF1Q8ND25 227 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 MRI1Q9BV20 369 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 RHOFQ9HBH0 211 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 NOX4Q9NPH5 578 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 RBFOX1Q9NWB1 397 aaKnown RBP12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 SLC25A10Q9UBX3 287 aaPredicted RBP12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 OPN4Q9UHM6 478 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 FOXJ3Q9UPW0 622 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 AUP1Q9Y679 476 aa12.03□□□□□ -0.48
SQSTM1-205ENST00000464493 TRAV8-7A0A075B6U6 113 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 PIN1P1O15428 100 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 KDM4BO94953 1096 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 LIPFP07098 398 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 NDUFB7P17568 137 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 FSTP19883 344 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 ZNF93P35789 620 aaPredicted RBP12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 CEBPDP49716 269 aaPredicted RBP12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 CAV3P56539 151 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 DDI2Q5TDH0 399 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 FIP1L1Q6UN15 594 aaKnown RBP12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 ZNF367Q7RTV3 350 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 SPARTQ8N0X7 666 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 SVOPQ8N4V2 548 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 PNLDC1Q8NA58 520 aaKnown RBP12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 METRNQ9UJH8 293 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 JMJD1CQ15652 2540 aa12.02□□□□□ -0.49
SQSTM1-205ENST00000464493 CUBNO60494 3623 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 NAV3Q8IVL0 2385 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 GABRPO00591 440 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 MAS1P04201 325 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 SFTPBP07988 381 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 CHRM2P08172 466 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 CALCBP10092 127 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 PRKACAP17612 351 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 ADRA2CP18825 462 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 PTGFRP43088 359 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 CAPZA1P52907 286 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 INSL4Q14641 139 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 ZNF146Q15072 292 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms