RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 KNG1P01042 644 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 LIMS3P0CW19 117 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 LIMS4P0CW20 117 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 ETV1P50549 477 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 BLMHQ13867 455 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 CD177Q8N6Q3 437 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 KIR3DL3Q8N743 410 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 ASCC1Q8N9N2 400 aaKnown RBP12.67□□□□□ -0.38
VARS-219ENST00000461328 RFT1Q96AA3 541 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 ZNF649Q9BS31 505 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 JAM3Q9BX67 310 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 HES4Q9HCC6 221 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 DIMT1Q9UNQ2 313 aaKnown RBP12.67□□□□□ -0.38
VARS-219ENST00000461328 CAB39Q9Y376 341 aaPredicted RBP12.67□□□□□ -0.38
VARS-219ENST00000461328 HSPE1-MOB4S4R3N1 261 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 TENM1Q9UKZ4 2725 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 TRBV23-1A0A0A0MS06 115 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 IGHV1-69DA0A0B4J2H0 117 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 IGKV1-9A0A0C4DH69 117 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 IGHV1-69P01742 117 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 HCKP08631 526 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 GNAO1P09471 354 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
VARS-219ENST00000461328 SLC34A1Q06495 639 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 OR2G6Q5TZ20 316 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 MKXQ8IYA7 352 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 Q8IYB0 196 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 C8orf46Q8TAG6 207 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 TMEM80Q96HE8 168 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 ZCCHC4Q9H5U6 513 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 MTCH1Q9NZJ7 389 aa12.66□□□□□ -0.38
VARS-219ENST00000461328 NKX1-2Q9UD57 310 aaPredicted RBP12.66□□□□□ -0.38
VARS-219ENST00000461328 EFCAB10A6NFE3 127 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 SPRY1O43609 319 aaPredicted RBP12.65□□□□□ -0.38
VARS-219ENST00000461328 SOX2P48431 317 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 SNU13P55769 128 aaKnown RBP12.65□□□□□ -0.38
VARS-219ENST00000461328 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 RPL31P62899 125 aaKnown RBP12.65□□□□□ -0.38
VARS-219ENST00000461328 PRB3Q04118 309 aaPredicted RBP12.65□□□□□ -0.38
VARS-219ENST00000461328 RPL22L1Q6P5R6 122 aaKnown RBP12.65□□□□□ -0.38
VARS-219ENST00000461328 SERPINA12Q8IW75 414 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 OR5D18Q8NGL1 313 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 OR5D14Q8NGL3 314 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 DMRTB1Q96MA1 342 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 SPACA5Q96QH8 159 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 PRDM13Q9H4Q3 707 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 NOX4Q9NPH5 578 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 TNFRSF19Q9NS68 423 aa12.65□□□□□ -0.38
VARS-219ENST00000461328 RBFOX1Q9NWB1 397 aaKnown RBP12.65□□□□□ -0.38
VARS-219ENST00000461328 A0A1W2PPH5 198 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 F8VVB4 439 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 F8VWA3 439 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 H0YHG0 523 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 M0R1W7 72 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 MYL12BO14950 172 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 SULT1B1O43704 296 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 CD2P06729 351 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 PRKACAP17612 351 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 BCL3P20749 454 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 EEF1B2P24534 225 aaKnown RBP12.64□□□□□ -0.39
VARS-219ENST00000461328 GUCA2AQ02747 115 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 COL10A1Q03692 680 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 CCDC58Q4VC31 144 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 XAF1Q6GPH4 301 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 C16orf87Q6PH81 154 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 Q6YL49 198 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 AHSA2Q719I0 299 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 STX19Q8N4C7 294 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 BPIFB6Q8NFQ5 453 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 OR4M1Q8NGD0 313 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 GPR148Q8TDV2 347 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 CPNE2Q96FN4 548 aaPredicted RBP12.64□□□□□ -0.39
VARS-219ENST00000461328 METTL8Q9H825 291 aaKnown RBP12.64□□□□□ -0.39
VARS-219ENST00000461328 C19orf12Q9NSK7 152 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 CLEC2DQ9UHP7 191 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 GLS2Q9UI32 602 aa12.64□□□□□ -0.39
VARS-219ENST00000461328 A0A1W2PRD5 423 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 A0A1W2PRF3 423 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 A0A1W2PRM7 423 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 MAGEB3O15480 346 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 ANGPTL7O43827 346 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 XPNPEP2O43895 674 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 HAND1O96004 215 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 MT-ND2P03891 347 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 TK1P04183 234 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 CHRM2P08172 466 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 MELTFP08582 738 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 CALCBP10092 127 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 PIPP12273 146 aaPredicted RBP12.63□□□□□ -0.39
VARS-219ENST00000461328 GABRR1P24046 479 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 DLX1P56177 255 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 EDDM3BP56851 147 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 PDZK1IP1Q13113 114 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 KLRD1Q13241 179 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 NCR3LG1Q68D85 454 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 GDPD3Q7L5L3 318 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 FAM58AQ8N1B3 248 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms