RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 MYL12AP19105 171 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 METAP1DQ6UB28 335 aaPredicted RBP18.49■□□□□ 0.55
TRAF4-207ENST00000461195 C1orf122Q6ZSJ8 110 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 Q8IYB0 196 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 C8orf59Q8N0T1 100 aaPredicted RBP18.49■□□□□ 0.55
TRAF4-207ENST00000461195 Q8N7P7 452 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 SLC25A28Q96A46 364 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 ZCCHC4Q9H5U6 513 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 NEK6Q9HC98 313 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 SIRT7Q9NRC8 400 aa18.49■□□□□ 0.55
TRAF4-207ENST00000461195 EXOSC1Q9Y3B2 195 aaKnown RBP18.49■□□□□ 0.55
TRAF4-207ENST00000461195 TMEM89A2RUT3 159 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 GNAO1P09471 354 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 POU3F4P49335 361 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 GTF2A1P52655 376 aaPredicted RBP18.48■□□□□ 0.55
TRAF4-207ENST00000461195 MED21Q13503 144 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 BLMHQ13867 455 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 SLC9A3R2Q15599 337 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 CCDC58Q4VC31 144 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 C12orf54Q6X4T0 127 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 SERPINA12Q8IW75 414 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 PDZD9Q8IXQ8 264 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 FAM185AQ8N0U4 392 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 OR13C9Q8NGT0 318 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 TMEM80Q96HE8 168 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 FAM234AQ9H0X4 552 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 NOX4Q9NPH5 578 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 DHDHQ9UQ10 334 aa18.48■□□□□ 0.55
TRAF4-207ENST00000461195 TK1P04183 234 aa18.47■□□□□ 0.55
TRAF4-207ENST00000461195 RNASE1P07998 156 aaKnown RBP18.47■□□□□ 0.55
TRAF4-207ENST00000461195 CHRM2P08172 466 aa18.47■□□□□ 0.55
TRAF4-207ENST00000461195 GUCA2AQ02747 115 aa18.47■□□□□ 0.55
TRAF4-207ENST00000461195 OR2G6Q5TZ20 316 aa18.47■□□□□ 0.55
TRAF4-207ENST00000461195 RPL22L1Q6P5R6 122 aaKnown RBP18.47■□□□□ 0.55
TRAF4-207ENST00000461195 PARP16Q8N5Y8 322 aa18.47■□□□□ 0.55
TRAF4-207ENST00000461195 OR5D14Q8NGL3 314 aa18.47■□□□□ 0.55
TRAF4-207ENST00000461195 TSEN15Q8WW01 171 aaKnown RBP18.47■□□□□ 0.55
TRAF4-207ENST00000461195 EMG1Q92979 244 aaKnown RBP18.47■□□□□ 0.55
TRAF4-207ENST00000461195 METTL8Q9H825 291 aaKnown RBP18.47■□□□□ 0.55
TRAF4-207ENST00000461195 C19orf12Q9NSK7 152 aa18.47■□□□□ 0.55
TRAF4-207ENST00000461195 CHCHD3Q9NX63 227 aaKnown RBP18.47■□□□□ 0.55
TRAF4-207ENST00000461195 NKX1-2Q9UD57 310 aaPredicted RBP18.47■□□□□ 0.55
TRAF4-207ENST00000461195 HOXA3O43365 443 aaPredicted RBP18.46■□□□□ 0.55
TRAF4-207ENST00000461195 COMPP49747 757 aaPredicted RBP18.46■□□□□ 0.55
TRAF4-207ENST00000461195 RPL31P62899 125 aaKnown RBP18.46■□□□□ 0.55
TRAF4-207ENST00000461195 COL10A1Q03692 680 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 SLC34A1Q06495 639 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 PDZK1IP1Q13113 114 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 CDK5R1Q15078 307 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 FIP1L1Q6UN15 594 aaKnown RBP18.46■□□□□ 0.55
TRAF4-207ENST00000461195 Q6YL49 198 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 ASCC1Q8N9N2 400 aaKnown RBP18.46■□□□□ 0.55
TRAF4-207ENST00000461195 TBC1D15Q8TC07 691 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 GGHQ92820 318 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 RFT1Q96AA3 541 aa18.46■□□□□ 0.55
TRAF4-207ENST00000461195 UNKLQ9H9P5 680 aaKnown RBP18.46■□□□□ 0.55
TRAF4-207ENST00000461195 A0A1W2PPH5 198 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 EFCAB10A6NFE3 127 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 RNASEK-C17orf49H0YIS7 233 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 K7N7A8 449 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 SPRY1O43609 319 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-207ENST00000461195 ALX3O95076 343 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 BCL3P20749 454 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 NPBWR2P48146 333 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 NCR3LG1Q68D85 454 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 XAF1Q6GPH4 301 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 FAM58AQ8N1B3 248 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 RPS4Y2Q8TD47 263 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 SPACA5Q96QH8 159 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 SEBOXQ9HB31 216 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-207ENST00000461195 RBFOX1Q9NWB1 397 aaKnown RBP18.45■□□□□ 0.54
TRAF4-207ENST00000461195 BABAM2Q9NXR7 383 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 CLEC2DQ9UHP7 191 aa18.45■□□□□ 0.54
TRAF4-207ENST00000461195 A0A0U1RQK1 487 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 SULT1B1O43704 296 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 HCKP08631 526 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 PIPP12273 146 aaPredicted RBP18.44■□□□□ 0.54
TRAF4-207ENST00000461195 EEF1B2P24534 225 aaKnown RBP18.44■□□□□ 0.54
TRAF4-207ENST00000461195 DLX1P56177 255 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 PRB3Q04118 309 aaPredicted RBP18.44■□□□□ 0.54
TRAF4-207ENST00000461195 ST3GAL4Q11206 333 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 KLRD1Q13241 179 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 PIP4P2Q8N4L2 257 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 OR4M1Q8NGD0 313 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 OR5D13Q8NGL4 314 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 OR52N1Q8NH53 320 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 GPR148Q8TDV2 347 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 FBLIM1Q8WUP2 373 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 TNFRSF14Q92956 283 aa18.44■□□□□ 0.54
TRAF4-207ENST00000461195 CNOT2Q9NZN8 540 aaKnown RBP18.44■□□□□ 0.54
TRAF4-207ENST00000461195 OGG1O15527 345 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 ANGPTL7O43827 346 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 ZNF737O75373 536 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 HAND1O96004 215 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 MELTFP08582 738 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 HKR1P10072 659 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 TMEM200BQ69YZ2 307 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 LAIR2Q6ISS4 152 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 OR5D18Q8NGL1 313 aa18.43■□□□□ 0.54
TRAF4-207ENST00000461195 RGP1Q92546 391 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms