RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ST8SIA3O43173 380 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 QDPRP09417 244 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 ZNF17P17021 662 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 GALNSP34059 522 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 FOXO1Q12778 655 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 FBXW12Q6X9E4 464 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 C1QL2Q7Z5L3 287 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 MVB12AQ96EY5 273 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 REEP6Q96HR9 211 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 TMEM68Q96MH6 324 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 DUSP15Q9H1R2 295 aaPredicted RBP13.55□□□□□ -0.24
SSR4-206ENST00000460616 KIAA1456Q9P272 454 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 KMT2EQ8IZD2 1858 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 SPAG17Q6Q759 2223 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 A0A087WZY1 265 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 FOXI3A8MTJ6 420 aaPredicted RBP13.55□□□□□ -0.24
SSR4-206ENST00000460616 A8MWP6 167 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 ALG1L2C9J202 215 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 OR5AC1P0C628 307 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 POU3F1Q03052 451 aaPredicted RBP13.55□□□□□ -0.24
SSR4-206ENST00000460616 TMEM187Q14656 261 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 GRINAQ7Z429 371 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 OR52M1Q8NGK5 317 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 ADIPOR1Q96A54 375 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 TCFL5Q9UL49 500 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 WASF3Q9UPY6 502 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 WSB1Q9Y6I7 421 aa13.55□□□□□ -0.24
SSR4-206ENST00000460616 C9J4A7 227 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 RRP8O43159 456 aaKnown RBP13.54□□□□□ -0.24
SSR4-206ENST00000460616 TDGF1P13385 188 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 DUSP1P28562 367 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 CEACAM6P40199 344 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 OR8G1Q15617 311 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 KIAA0895LQ68EN5 471 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 SLC35E3Q7Z769 313 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 DECR2Q9NUI1 292 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 FOXD3Q9UJU5 478 aaPredicted RBP13.54□□□□□ -0.24
SSR4-206ENST00000460616 TDRD6O60522 2096 aaKnown RBP13.54□□□□□ -0.24
SSR4-206ENST00000460616 LRP4O75096 1905 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 IGKV1-9A0A0C4DH69 117 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 SCAF4O95104 1147 aaKnown RBP13.54□□□□□ -0.24
SSR4-206ENST00000460616 HSPB1P04792 205 aaKnown RBP13.54□□□□□ -0.24
SSR4-206ENST00000460616 ATP6V0CP27449 155 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 FZD2Q14332 565 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 ICAM4Q14773 271 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 ABCA11PQ4W5N1 156 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 OR8G5Q8NG78 346 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 OR8B12Q8NGG6 310 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 TOMM40LQ969M1 308 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 RAB24Q969Q5 203 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 NAA60Q9H7X0 242 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 MOB1AQ9H8S9 216 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 ZNF319Q9P2F9 582 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 AK3Q9UIJ7 227 aa13.54□□□□□ -0.24
SSR4-206ENST00000460616 MCTS1Q9ULC4 181 aaKnown RBP13.54□□□□□ -0.24
SSR4-206ENST00000460616 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 A0A1B0GWJ7 208 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 H0YIG0 161 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 LAMTOR5O43504 91 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 GLI4P10075 376 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 CASP6P55212 293 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 HSF1Q00613 529 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
SSR4-206ENST00000460616 ZP4Q12836 540 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 GNMTQ14749 295 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 KISS1Q15726 138 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 TCEAL6Q6IPX3 200 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 H1FNTQ75WM6 255 aaPredicted RBP13.53□□□□□ -0.24
SSR4-206ENST00000460616 C1orf210Q8IVY1 113 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 SLC37A2Q8TED4 501 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 RTN4IP1Q8WWV3 396 aaPredicted RBP13.53□□□□□ -0.24
SSR4-206ENST00000460616 EMC6Q9BV81 110 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 FAM230AA0A1W2PPH8 454 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 A0A1W2PQD3 144 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 TNFRSF10CO14798 259 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 SNRPCP09234 159 aaKnown RBP13.53□□□□□ -0.24
SSR4-206ENST00000460616 FGF7P21781 194 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 HNRNPA2B1P22626 353 aaKnown RBP13.53□□□□□ -0.24
SSR4-206ENST00000460616 ZNF121P58317 390 aaPredicted RBP13.53□□□□□ -0.24
SSR4-206ENST00000460616 ZNF266Q14584 549 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 JOSD1Q15040 202 aaPredicted RBP13.53□□□□□ -0.24
SSR4-206ENST00000460616 ARL6IP1Q15041 203 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 OGFOD3Q6PK18 319 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 C6orf201Q7Z4U5 140 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 C1orf87Q8N0U7 546 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 PLPP5Q8NEB5 264 aa13.53□□□□□ -0.24
SSR4-206ENST00000460616 NOL4LQ96MY1 436 aaPredicted RBP13.53□□□□□ -0.24
SSR4-206ENST00000460616 ATXN7O15265 892 aaPredicted RBP13.52□□□□□ -0.24
SSR4-206ENST00000460616 PGA4P0DJD7 388 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 PGA5P0DJD9 388 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 SFTPDP35247 375 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 HLA-DRB3P79483 266 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 PPA1Q15181 289 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 TSPO2Q5TGU0 170 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 RTL6Q6ICC9 239 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 FBXL14Q8N1E6 418 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 OR2AJ1Q8NGZ0 328 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 OR14L1PQ8NHC6 308 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 SSC4DQ8WTU2 575 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 NPRL2Q8WTW4 380 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms