RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SIGMAR1Q99720 223 aa6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 SLC35B3Q9H1N7 401 aa6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 MEGF9Q9H1U4 602 aa6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 MTHFD2LQ9H903 347 aaPredicted RBP6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 WDR54Q9H977 334 aa6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 MEPEQ9NQ76 525 aaPredicted RBP6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 YAE1D1Q9NRH1 226 aa6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 FBXW2Q9UKT8 454 aa6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 C14orf166Q9Y224 244 aaKnown RBP6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 B3GALT1Q9Y5Z6 326 aa6.03□□□□□ -1.44
CUBNP3-201ENST00000457461 ANKUB1A6NFN9 424 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 PATE3B3GLJ2 98 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 AQP7O14520 342 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 ARPC1BO15143 372 aaKnown RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 FOXS1O43638 330 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 BRI3O95415 125 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 ANKRD34CP0C6C1 535 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 CRYBA2P53672 197 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 PCBP3P57721 371 aaKnown RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 RAB38P57729 211 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 HERV-K104P63124 156 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 BTG2P78543 158 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 SSBP1Q04837 148 aaKnown RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 ZNF154Q13106 437 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 MELKQ14680 651 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 C5orf47Q569G3 176 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 SPIN3Q5JUX0 258 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 COX20Q5RI15 118 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 CCDC144NLQ6NUI1 221 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 TNFAIP8L2Q6P589 184 aaPredicted RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 TGIF2LYQ8IUE0 185 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 CA13Q8N1Q1 262 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 PAQR4Q8N4S7 273 aaPredicted RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 BMPERQ8N8U9 685 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 OR4B1Q8NGF8 309 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 NETO1Q8TDF5 533 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 TMEM239Q8WW34 195 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 NAT6Q93015 286 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 TSLPQ969D9 159 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 MOAP1Q96BY2 351 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 WDR89Q96FK6 387 aaPredicted RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 MRAP2Q96G30 205 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 CIB3Q96Q77 187 aaPredicted RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 ALG12Q9BV10 488 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 NGBQ9NPG2 151 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 FSCN3Q9NQT6 498 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 TESQ9UGI8 421 aaKnown RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 FARSAQ9Y285 508 aaKnown RBP6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 SPEGQ15772 3267 aa6.02□□□□□ -1.45
CUBNP3-201ENST00000457461 A0A087WV62 115 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 A0A1B0GW15 77 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 A0A1W2PS29 197 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 TMEM229AB2RXF0 380 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 SLC17A3O00476 420 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ATXN7O15265 892 aaPredicted RBP6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ZNF208O43345 1280 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 GCM2O75603 506 aaPredicted RBP6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 GLSO94925 669 aaPredicted RBP6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 DUS4LO95620 317 aaKnown RBP6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 CFIP05156 583 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 OR4A8P0C604 315 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 PGA3P0DJD8 388 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ESDP10768 282 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 GLIPR1P48060 266 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 NCBP2P52298 156 aaKnown RBP eCLIP6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 PIGPP57054 158 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 UBE2KP61086 200 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 IGLV3-21P80748 117 aaPredicted RBP6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ST3GAL3Q11203 375 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 RAB40BQ12829 278 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 HSPB3Q12988 150 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 OXLD1Q5BKU9 147 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 GUSBP11Q6P575 273 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ANKRD16Q6P6B7 361 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 CBLL1Q75N03 491 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 SULF2Q8IWU5 870 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ZNF485Q8NCK3 441 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 OR6N1Q8NGY5 312 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 GEMIN6Q8WXD5 167 aaKnown RBP6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 FRZBQ92765 325 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ZNF75AQ96N20 296 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 SIGLEC12Q96PQ1 595 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 CITED1Q99966 193 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 SCRT1Q9BWW7 348 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 MOB1AQ9H8S9 216 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 A4GALTQ9NPC4 353 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 CLN8Q9UBY8 286 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 UQCR10Q9UDW1 63 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 LAMTOR2Q9Y2Q5 125 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 OTOGLQ3ZCN5 2332 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 DSPPQ9NZW4 1301 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 IGHV1-69-2A0A0G2JMI3 117 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 A0A1W2PQM1 296 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 TMEM235A6NFC5 223 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 HELTA6NFD8 242 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 ZNF860A6NHJ4 632 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 GLOD5A6NK44 160 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 FAM166BA8MTA8 275 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 C1QTNF9BB2RNN3 333 aa6.01□□□□□ -1.45
CUBNP3-201ENST00000457461 F8WDY8 70 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms