RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PNMA8CA0A1B0GUJ8 204 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 RFPL4AA6NLU0 287 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ZNF879B4DU55 563 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 RFPL4AL1F8VTS6 287 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 SULT1B1O43704 296 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 NOS1APO75052 506 aaPredicted RBP12.04□□□□□ -0.48
USP39-206ENST00000448971 FCN3O75636 299 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 LIPFP07098 398 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ACAA1P09110 424 aaPredicted RBP12.04□□□□□ -0.48
USP39-206ENST00000448971 TAS2R43P59537 309 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 SERPINA12Q8IW75 414 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ZFP41Q8N8Y5 198 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ZNRF1Q8ND25 227 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 OR5D18Q8NGL1 313 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 RGP1Q92546 391 aaPredicted RBP12.04□□□□□ -0.48
USP39-206ENST00000448971 EMG1Q92979 244 aaKnown RBP12.04□□□□□ -0.48
USP39-206ENST00000448971 UPRTQ96BW1 309 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ANKRD60Q9BZ19 345 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ELL3Q9HB65 397 aaPredicted RBP12.04□□□□□ -0.48
USP39-206ENST00000448971 SCN3BQ9NY72 215 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ONECUT1Q9UBC0 465 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 RPUSD1Q9UJJ7 312 aaKnown RBP12.04□□□□□ -0.48
USP39-206ENST00000448971 ZNF222Q9UK12 451 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 NUP50Q9UKX7 468 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 ERGIC3Q9Y282 383 aa12.04□□□□□ -0.48
USP39-206ENST00000448971 A0A1W2PQ09 198 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 TOX4O94842 621 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 LALBAP00709 142 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 PPIAL4GP0DN37 164 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 MYF6P23409 242 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 FPR2P25090 351 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 C21orf33P30042 268 aaPredicted RBP12.03□□□□□ -0.48
USP39-206ENST00000448971 WNT4P56705 351 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 C11orf91Q3C1V1 193 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 KLF17Q5JT82 389 aaPredicted RBP12.03□□□□□ -0.48
USP39-206ENST00000448971 PRR31Q5SQ13 230 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 C6orf141Q5SZD1 244 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 FIP1L1Q6UN15 594 aaKnown RBP12.03□□□□□ -0.48
USP39-206ENST00000448971 MKXQ8IYA7 352 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 Q8IYB0 196 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 OR5D14Q8NGL3 314 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 TMEM106AQ96A25 262 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 CPNE2Q96FN4 548 aaPredicted RBP12.03□□□□□ -0.48
USP39-206ENST00000448971 SDSLQ96GA7 329 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 DCTN5Q9BTE1 182 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 SUCNR1Q9BXA5 334 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 MS4A7Q9GZW8 240 aaPredicted RBP12.03□□□□□ -0.48
USP39-206ENST00000448971 HES4Q9HCC6 221 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 ESM1Q9NQ30 184 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 TAS2R4Q9NYW5 299 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 MTCH1Q9NZJ7 389 aa12.03□□□□□ -0.48
USP39-206ENST00000448971 PTGES3LE9PB15 166 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 MAGEB3O15480 346 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ANGPTL7O43827 346 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 KNG1P01042 644 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 CDK1P06493 297 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 SFTPBP07988 381 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 IGHV4-38-2P0DP08 117 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 RAB3AP20336 220 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 SNU13P55769 128 aaKnown RBP12.02□□□□□ -0.49
USP39-206ENST00000448971 CAV3P56539 151 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ERVK11-1P61568 191 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ARF6P62330 175 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 PPP3R1P63098 170 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 RIPK1Q13546 671 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 AWAT1Q58HT5 328 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 GPR157Q5UAW9 335 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 CMTM4Q8IZR5 234 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 FAM185AQ8N0U4 392 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ZNF561Q8N587 486 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 PARP16Q8N5Y8 322 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 CD177Q8N6Q3 437 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ZDHHC22Q8N966 263 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ASCC1Q8N9N2 400 aaKnown RBP12.02□□□□□ -0.49
USP39-206ENST00000448971 OR13C5Q8NGS8 318 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 RPS4Y2Q8TD47 263 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 MYDGFQ969H8 173 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 CNBD2Q96M20 576 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 WDFY2Q96P53 400 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 JMJD8Q96S16 334 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 MND1Q9BWT6 205 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 RBFOX1Q9NWB1 397 aaKnown RBP12.02□□□□□ -0.49
USP39-206ENST00000448971 FKBP14Q9NWM8 211 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ZNF69Q9UC07 566 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 ZNF281Q9Y2X9 895 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 MAB21L2Q9Y586 359 aa12.02□□□□□ -0.49
USP39-206ENST00000448971 SIRT4Q9Y6E7 314 aaPredicted RBP12.02□□□□□ -0.49
USP39-206ENST00000448971 OGG1O15527 345 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 MT-ND2P03891 347 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 PRKACAP17612 351 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 BCL3P20749 454 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 PRDX2P32119 198 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 VHLP40337 213 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 DMKNQ6E0U4 476 aaPredicted RBP12.01□□□□□ -0.49
USP39-206ENST00000448971 RBMS3Q6XE24 437 aaKnown RBP12.01□□□□□ -0.49
USP39-206ENST00000448971 GHSRQ92847 366 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 GPER1Q99527 375 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 FAM192AQ9GZU8 254 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 SIRPDQ9H106 197 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms