RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RNASE1P07998 156 aaKnown RBP10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 RPSAP08865 295 aaKnown RBP10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 CCDC159P0C7I6 412 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 CAPGP40121 348 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 NPBWR2P48146 333 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 COMPP49747 757 aaPredicted RBP10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 COL10A1Q03692 680 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 PDZK1IP1Q13113 114 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 OR2G6Q5TZ20 316 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 TMEM200BQ69YZ2 307 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 XAF1Q6GPH4 301 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 LAIR2Q6ISS4 152 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 Q6YL49 198 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 LHFPL2Q6ZUX7 228 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 MKXQ8IYA7 352 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 FAM185AQ8N0U4 392 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 OR4M1Q8NGD0 313 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 OR13C9Q8NGT0 318 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 GGHQ92820 318 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 RFT1Q96AA3 541 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 SPSB1Q96BD6 273 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 OPALINQ96PE5 141 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 SPACA5Q96QH8 159 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 COMMD4Q9H0A8 199 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 ZCCHC4Q9H5U6 513 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 NOX4Q9NPH5 578 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 CLEC2DQ9UHP7 191 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 DIMT1Q9UNQ2 313 aaKnown RBP10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 CAB39Q9Y376 341 aaPredicted RBP10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 HSPE1-MOB4S4R3N1 261 aa10.45□□□□□ -0.74
PRPF40A-203ENST00000448428 A0A0U1RQK1 487 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 K7N7A8 449 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 CYB5AP00167 134 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 CHRM2P08172 466 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 MELTFP08582 738 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 OCM2P0CE71 109 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 OCMP0CE72 109 aaPredicted RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 HKR1P10072 659 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 CALCBP10092 127 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 BCL3P20749 454 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 POU3F4P49335 361 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 RPL31P62899 125 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 KLRD1Q13241 179 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 BLMHQ13867 455 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 CCDC58Q4VC31 144 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 RPL22L1Q6P5R6 122 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 C16orf87Q6PH81 154 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 CRIP3Q6Q6R5 217 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 TMPRSS11AQ6ZMR5 421 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 SERPINA12Q8IW75 414 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 FAM58AQ8N1B3 248 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 PARP16Q8N5Y8 322 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 OR5D14Q8NGL3 314 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 HAVCR2Q8TDQ0 301 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 RGP1Q92546 391 aaPredicted RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 EMG1Q92979 244 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 TMEM80Q96HE8 168 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 FAM234AQ9H0X4 552 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 METTL8Q9H825 291 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 UNKLQ9H9P5 680 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 TNFRSF19Q9NS68 423 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 RBFOX1Q9NWB1 397 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 IL36RNQ9UBH0 155 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 DHDHQ9UQ10 334 aa10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 SIRT4Q9Y6E7 314 aaPredicted RBP10.44□□□□□ -0.74
PRPF40A-203ENST00000448428 IGKV1-12A0A0C4DH73 117 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 A0A1W2PRD5 423 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 A0A1W2PRF3 423 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 A0A1W2PRM7 423 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 OGG1O15527 345 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 ANGPTL7O43827 346 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 ZNF737O75373 536 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 ALX3O95076 343 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 IGKV1D-12P01611 117 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 MYL12AP19105 171 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 DUSP1P28562 367 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 GUCA2AQ02747 115 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 GABPB1Q06547 395 aaPredicted RBP10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 ST3GAL4Q11206 333 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 Q8IYB0 196 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 C8orf59Q8N0T1 100 aaPredicted RBP10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 PNKDQ8N490 385 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 C11orf42Q8N5U0 333 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 ASCC1Q8N9N2 400 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 RPS4Y2Q8TD47 263 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 FBLIM1Q8WUP2 373 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 TSEN15Q8WW01 171 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 TFAP2CQ92754 450 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 TAF15Q92804 592 aaKnown RBP eCLIP10.43□□□□□ -0.748e-10■□□□□ 10.2
PRPF40A-203ENST00000448428 SEBOXQ9HB31 216 aaPredicted RBP10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 BABAM2Q9NXR7 383 aa10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 EXOSC1Q9Y3B2 195 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-203ENST00000448428 STAB1Q9NY15 2570 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 TMEM82A0PJX8 343 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 NPFFO15130 113 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 SULT1B1O43704 296 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 XPNPEP2O43895 674 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 HAND1O96004 215 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 LALBAP00709 142 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms