RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 METAP1P53582 386 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 FAM78BQ5VT40 261 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 RSRP1Q9BUV0 290 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM147Q9BVK8 224 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 FOXQ1Q9C009 403 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 LOXL2Q9Y4K0 774 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 A0A087X0M5 115 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 TRBV5-3A0A0A0MS03 114 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 A0A1B0GX30 115 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 FCGR3BO75015 233 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 LGALSLQ3ZCW2 172 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-204ENST00000448183 IGSF11Q5DX21 431 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 NCMAPQ5T1S8 102 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 C8orf82Q6P1X6 216 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-204ENST00000448183 CLEC18BQ6UXF7 455 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 SLC26A10Q8NG04 563 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 KISS1RQ969F8 398 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-204ENST00000448183 MCHR2Q969V1 340 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 LRRC61Q9BV99 259 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 ICE1Q9Y2F5 2266 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 C7orf77A4D0Y5 90 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SOX15O60248 233 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SMIM17P0DL12 118 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 GLULP15104 373 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF32P17041 273 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 HLA-GP17693 338 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 BMP5P22003 454 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 MDH2P40926 338 aaKnown RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 P2RY1P47900 373 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 POLR2GP62487 172 aaKnown RBP eCLIP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 COTL1Q14019 142 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SLC25A30Q5SVS4 291 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 TRILQ7L0X0 811 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 OR2M7Q8NG81 312 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 LHFPL5Q8TAF8 219 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ISOC2Q96AB3 205 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 PLPPR2Q96GM1 343 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 GPR87Q9BY21 358 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ZMAT5Q9UDW3 170 aaKnown RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF107Q9UII5 783 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ICAM5Q9UMF0 924 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 LIPGQ9Y5X9 500 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 PHIPQ8WWQ0 1821 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 RRP8O43159 456 aaKnown RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SLC25A5P05141 298 aaKnown RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 FGF2P09038 288 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 OR5AL1P0C617 328 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 IRF3Q14653 427 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 COX19Q49B96 90 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 WIPI1Q5MNZ9 446 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 LIMS2Q7Z4I7 341 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF683Q8IZ20 524 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 TP53I13Q8NBR0 393 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 OR4D9Q8NGE8 314 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 PRSS3P2Q8NHM4 247 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 NUBPLQ8TB37 319 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 OIT3Q8WWZ8 545 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 EID2BQ96D98 161 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 MOGAT1Q96PD6 335 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 TBX21Q9UL17 535 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ABCA3Q99758 1704 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 METTL12A8MUP2 240 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 B4DEV8 164 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 PLPP3O14495 311 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 MBPP02686 304 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 CRISP2P16562 243 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 TNFRSF1AP19438 455 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 C19orf57Q0VDD7 668 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 RPEL1Q2QD12 228 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF774Q6NX45 483 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 TRAT1Q6PIZ9 186 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 PRSS41Q7RTY9 318 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 OR11G2Q8NGC1 345 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 RFESDQ8TAC1 157 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 ANXA10Q9UJ72 324 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 PSG11Q9UQ72 335 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 MTCH2Q9Y6C9 303 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SNCGO76070 127 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SRFP11831 508 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 HTR1DP28221 377 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 FGF8P55075 233 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM215Q68D42 235 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 CBLN3Q6UW01 205 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 VN1R4Q7Z5H5 301 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 RPS4Y2Q8TD47 263 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 SEC16AO15027 2179 aa6.91□□□□□ -1.3
NEDD9-204ENST00000448183 FFAR1O14842 300 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ERVS71-1P61550 626 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF79Q15937 498 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 Q3ZCU0 254 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 PABPC1L2AQ5JQF8 200 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 KHDC1LQ5JSQ8 128 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ETFRF1Q6IPR1 90 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 SLC25A42Q86VD7 318 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ALG14Q96F25 216 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 PECRQ9BY49 303 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms