RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DLGAP1O14490 977 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 IGLV1-47P01700 117 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 PPP1R8Q12972 351 aaKnown RBP11.39□□□□□ -0.59
HMGN1-208ENST00000443046 MICAQ29983 383 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 CLVS2Q5SYC1 327 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 Q6ZSR3 168 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 C8orf86Q6ZUL3 223 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 HDXQ7Z353 690 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 KRT77Q7Z794 578 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 ZNF329Q86UD4 541 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 IQCF1Q8N6M8 205 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 CAPSLQ8WWF8 208 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 STMN2Q93045 179 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 CMTM5Q96DZ9 223 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 SNX22Q96L94 193 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 MYLK2Q9H1R3 596 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 ZFP57Q9NU63 452 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 NUFIP1Q9UHK0 495 aaKnown RBP11.39□□□□□ -0.59
HMGN1-208ENST00000443046 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 LY6LH3BQJ8 138 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 M0QZK8 103 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 PRODHO43272 600 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 H2AFXP16104 143 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-208ENST00000443046 HCCSP53701 268 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 ROM1Q03395 351 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 PLBD1Q6P4A8 553 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 ASRGL1Q7L266 308 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 ANGPTL5Q86XS5 388 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 ABHD12Q8N2K0 398 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 OR52N4Q8NGI2 321 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 OTULINQ96BN8 352 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 NIPSNAP1Q9BPW8 284 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 CCDC134Q9H6E4 229 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 GPR173Q9NS66 373 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 MTCH1Q9NZJ7 389 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 V9GYS6 101 aa11.38□□□□□ -0.59
HMGN1-208ENST00000443046 PLECQ15149 4684 aaKnown RBP11.37□□□□□ -0.59
HMGN1-208ENST00000443046 LCE6AA0A183 80 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 PRR23D1E9PI22 279 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-208ENST00000443046 PSMD9O00233 223 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 SRSF10O75494 262 aaKnown RBP11.37□□□□□ -0.59
HMGN1-208ENST00000443046 TTRP02766 147 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 PRR23D2P0DMB1 279 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-208ENST00000443046 SLC2A5P22732 501 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 CHATP28329 748 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 PRDX6P30041 224 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 GP2P55259 537 aaKnown RBP11.37□□□□□ -0.59
HMGN1-208ENST00000443046 BAIAP2L2Q6UXY1 529 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 RTN4RL2Q86UN3 420 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 COMMD2Q86X83 199 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 EGFL6Q8IUX8 553 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 TPRX1Q8N7U7 411 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 ZNF596Q8TC21 504 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 PRR25Q96S07 402 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 ASCL2Q99929 193 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 LAMP5Q9UJQ1 280 aa11.37□□□□□ -0.59
HMGN1-208ENST00000443046 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 LEUTXA8MZ59 168 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 PSPNO60542 156 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 ZNF254O75437 659 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 E2F6O75461 281 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 IGHA1P01876 353 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 ERP29P30040 261 aaKnown RBP11.36□□□□□ -0.59
HMGN1-208ENST00000443046 OR3A4PP47883 348 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 MFGE8Q08431 387 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-208ENST00000443046 EDDM3AQ14507 147 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 SLC35D3Q5M8T2 416 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 KCTD18Q6PI47 426 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-208ENST00000443046 ZNF679Q8IYX0 411 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 OR14K1Q8NGZ2 314 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 TEX47Q8TBZ9 253 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 CHPT1Q8WUD6 406 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 MROQ9BYG7 248 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 YIPF3Q9GZM5 350 aa11.36□□□□□ -0.59
HMGN1-208ENST00000443046 PAPOLBQ9NRJ5 636 aaKnown RBP11.36□□□□□ -0.59
HMGN1-208ENST00000443046 UBE2J1Q9Y385 318 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-208ENST00000443046 ARRDC5A6NEK1 342 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 DHRS7CA6NNS2 312 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 SNRNP70P08621 437 aaKnown RBP11.35□□□□□ -0.59
HMGN1-208ENST00000443046 PEX2P28328 305 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 CD34P28906 385 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 LUMP51884 338 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-208ENST00000443046 ARHGDIBP52566 201 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 C9orf152Q5JTZ5 239 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 THNSL2Q86YJ6 484 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms