RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 OCM2P0CE71 109 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 OCMP0CE72 109 aaPredicted RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 PIPP12273 146 aaPredicted RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 POU3F4P49335 361 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 UBA52P62987 128 aaKnown RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 MED21Q13503 144 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 RNF144BQ7Z419 303 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 MKXQ8IYA7 352 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 PARP16Q8N5Y8 322 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 Q8N7P7 452 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 FAM216AQ8WUB2 273 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 TSEN15Q8WW01 171 aaKnown RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 GATAD2BQ8WXI9 593 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 RGP1Q92546 391 aaPredicted RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 RFT1Q96AA3 541 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 SPACA5Q96QH8 159 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 PLCXD1Q9NUJ7 323 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 CHCHD3Q9NX63 227 aaKnown RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 BABAM2Q9NXR7 383 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 CNOT2Q9NZN8 540 aaKnown RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 PSORS1C1Q9UIG5 152 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 SIRT4Q9Y6E7 314 aaPredicted RBP19.45■□□□□ 0.7
VARS-217ENST00000440048 TRBV23-1A0A0A0MS06 115 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 IGHV1-69DA0A0B4J2H0 117 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 MDFIC2A0A1B0GVS7 189 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 A0A1W2PQ09 198 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 IGHV1-69P01742 117 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 NPBWR2P48146 333 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 PDZK1IP1Q13113 114 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 BAMBIQ13145 260 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 SERPINA12Q8IW75 414 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 OR5D14Q8NGL3 314 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 OR52N1Q8NH53 320 aa19.44■□□□□ 0.7
VARS-217ENST00000440048 C1orf147Q96MC9 270 aaPredicted RBP19.44■□□□□ 0.7
VARS-217ENST00000440048 TENM1Q9UKZ4 2725 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 DNAJC9-AS1A6NH13 148 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 OGG1O15527 345 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 SPRY1O43609 319 aaPredicted RBP19.43■□□□□ 0.7
VARS-217ENST00000440048 ALX3O95076 343 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 CYB5AP00167 134 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 LALBAP00709 142 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 BCL3P20749 454 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 AQP4P55087 323 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 DEFB112Q30KQ8 113 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 Q8IYB0 196 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 BPIFB6Q8NFQ5 453 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 EMG1Q92979 244 aaKnown RBP19.43■□□□□ 0.7
VARS-217ENST00000440048 DUX5Q96PT3 197 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 NEK6Q9HC98 313 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 SIRT7Q9NRC8 400 aa19.43■□□□□ 0.7
VARS-217ENST00000440048 RBFOX1Q9NWB1 397 aaKnown RBP19.43■□□□□ 0.7
VARS-217ENST00000440048 H0YJX3 145 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 TK1P04183 234 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 SOX2P48431 317 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 COL10A1Q03692 680 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 CRIP3Q6Q6R5 217 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 C1orf122Q6ZSJ8 110 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 AHSA2Q719I0 299 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 PDZD9Q8IXQ8 264 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 FAM185AQ8N0U4 392 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 ZNF485Q8NCK3 441 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 GPR148Q8TDV2 347 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 C19orf12Q9NSK7 152 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 IL36RNQ9UBH0 155 aa19.42■□□□□ 0.7
VARS-217ENST00000440048 NBEAL1Q6ZS30 2694 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 M0R1W7 72 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 SULT1B1O43704 296 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 ANGPTL7O43827 346 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 CHRM2P08172 466 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 PRTN3P24158 256 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 DLX1P56177 255 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 PRB3Q04118 309 aaPredicted RBP19.41■□□□□ 0.7
VARS-217ENST00000440048 FAM58AQ8N1B3 248 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 STX19Q8N4C7 294 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 OR5D18Q8NGL1 313 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 SMIM19Q96E16 107 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 FAM234AQ9H0X4 552 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 PRDM13Q9H4Q3 707 aa19.41■□□□□ 0.7
VARS-217ENST00000440048 IGKV1-12A0A0C4DH73 117 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 K7N7A8 449 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 IGKV1D-12P01611 117 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 HCKP08631 526 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 CALCBP10092 127 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 C21orf33P30042 268 aaPredicted RBP19.4■□□□□ 0.7
VARS-217ENST00000440048 RPL31P62899 125 aaKnown RBP19.4■□□□□ 0.7
VARS-217ENST00000440048 ACTG1P63261 375 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 ASPHD2Q6ICH7 369 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 ZNF529Q6P280 563 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 METAP1DQ6UB28 335 aaPredicted RBP19.4■□□□□ 0.7
VARS-217ENST00000440048 ASCC1Q8N9N2 400 aaKnown RBP19.4■□□□□ 0.7
VARS-217ENST00000440048 OR4M1Q8NGD0 313 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 TNFRSF14Q92956 283 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 ZDHHC16Q969W1 377 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 FKBP14Q9NWM8 211 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 ZNF281Q9Y2X9 895 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 DSCAML1Q8TD84 2053 aa19.4■□□□□ 0.7
VARS-217ENST00000440048 RNASEK-C17orf49H0YIS7 233 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 ZNF737O75373 536 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 HAND1O96004 215 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 PRKACAP17612 351 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms