RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 BLMHQ13867 455 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 OR2G6Q5TZ20 316 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 MKXQ8IYA7 352 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 EMG1Q92979 244 aaKnown RBP19.75■□□□□ 0.75
CPNE1-217ENST00000439669 RFT1Q96AA3 541 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 ZCCHC4Q9H5U6 513 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 DIMT1Q9UNQ2 313 aaKnown RBP19.75■□□□□ 0.75
CPNE1-217ENST00000439669 CAB39Q9Y376 341 aaPredicted RBP19.75■□□□□ 0.75
CPNE1-217ENST00000439669 EXOSC1Q9Y3B2 195 aaKnown RBP19.75■□□□□ 0.75
CPNE1-217ENST00000439669 HSPE1-MOB4S4R3N1 261 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 M0R1W7 72 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 HOXA3O43365 443 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-217ENST00000439669 GNAO1P09471 354 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 DLX1P56177 255 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 MED21Q13503 144 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 SLC9A3R2Q15599 337 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 Q8IYB0 196 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 Q8N7P7 452 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 ASCC1Q8N9N2 400 aaKnown RBP19.74■□□□□ 0.75
CPNE1-217ENST00000439669 SLC25A28Q96A46 364 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 NEK6Q9HC98 313 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 C19orf12Q9NSK7 152 aa19.74■□□□□ 0.75
CPNE1-217ENST00000439669 CHCHD3Q9NX63 227 aaKnown RBP19.74■□□□□ 0.75
CPNE1-217ENST00000439669 ERICH4A6NGS2 130 aa19.73■□□□□ 0.75
CPNE1-217ENST00000439669 SPRY1O43609 319 aaPredicted RBP19.73■□□□□ 0.75
CPNE1-217ENST00000439669 GUCA2AQ02747 115 aa19.73■□□□□ 0.75
CPNE1-217ENST00000439669 COL10A1Q03692 680 aa19.73■□□□□ 0.75
CPNE1-217ENST00000439669 KLRD1Q13241 179 aa19.73■□□□□ 0.75
CPNE1-217ENST00000439669 FIP1L1Q6UN15 594 aaKnown RBP19.73■□□□□ 0.75
CPNE1-217ENST00000439669 TMEM80Q96HE8 168 aa19.73■□□□□ 0.75
CPNE1-217ENST00000439669 SPACA5Q96QH8 159 aa19.73■□□□□ 0.75
CPNE1-217ENST00000439669 RBFOX1Q9NWB1 397 aaKnown RBP19.73■□□□□ 0.75
CPNE1-217ENST00000439669 NKX1-2Q9UD57 310 aaPredicted RBP19.73■□□□□ 0.75
CPNE1-217ENST00000439669 TMEM89A2RUT3 159 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 CLDN34H7C241 214 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 MT-ND2P03891 347 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 TK1P04183 234 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 RNASE1P07998 156 aaKnown RBP19.72■□□□□ 0.75
CPNE1-217ENST00000439669 HCKP08631 526 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 BCL3P20749 454 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 RPL31P62899 125 aaKnown RBP19.72■□□□□ 0.75
CPNE1-217ENST00000439669 CDK5R1Q15078 307 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 XAF1Q6GPH4 301 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 RPL22L1Q6P5R6 122 aaKnown RBP19.72■□□□□ 0.75
CPNE1-217ENST00000439669 METAP1DQ6UB28 335 aaPredicted RBP19.72■□□□□ 0.75
CPNE1-217ENST00000439669 SERPINA12Q8IW75 414 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 OR4M1Q8NGD0 313 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 OR5D18Q8NGL1 313 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 FAM234AQ9H0X4 552 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 METTL8Q9H825 291 aaKnown RBP19.72■□□□□ 0.75
CPNE1-217ENST00000439669 NOX4Q9NPH5 578 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 TNFRSF19Q9NS68 423 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 CLEC2DQ9UHP7 191 aa19.72■□□□□ 0.75
CPNE1-217ENST00000439669 A0A1W2PRD5 423 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 A0A1W2PRF3 423 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 A0A1W2PRM7 423 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 RNASEK-C17orf49H0YIS7 233 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 HAX1O00165 279 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 ANGPTL7O43827 346 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 CHRM2P08172 466 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 EEF1B2P24534 225 aaKnown RBP19.71■□□□□ 0.75
CPNE1-217ENST00000439669 NPBWR2P48146 333 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 SOX2P48431 317 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 SNU13P55769 128 aaKnown RBP19.71■□□□□ 0.75
CPNE1-217ENST00000439669 SLC34A1Q06495 639 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 PDZK1IP1Q13113 114 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 CCDC58Q4VC31 144 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 NCR3LG1Q68D85 454 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 C1orf122Q6ZSJ8 110 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 FAM58AQ8N1B3 248 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 OR5D14Q8NGL3 314 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 GGHQ92820 318 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 PRDM13Q9H4Q3 707 aa19.71■□□□□ 0.75
CPNE1-217ENST00000439669 A0A0U1RQK1 487 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 A0A1W2PPH5 198 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 EFCAB10A6NFE3 127 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 K7N7A8 449 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 SULT1B1O43704 296 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 XPNPEP2O43895 674 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 HAND1O96004 215 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 CALCBP10092 127 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 PIPP12273 146 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-217ENST00000439669 PRKACAP17612 351 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 ST3GAL4Q11206 333 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 Q6YL49 198 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 PIP4P2Q8N4L2 257 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 PARP16Q8N5Y8 322 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 GPR148Q8TDV2 347 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 RGP1Q92546 391 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-217ENST00000439669 BABAM2Q9NXR7 383 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 IL36RNQ9UBH0 155 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 FAM96BQ9Y3D0 163 aa19.7■□□□□ 0.74
CPNE1-217ENST00000439669 MELTFP08582 738 aa19.69■□□□□ 0.74
CPNE1-217ENST00000439669 DUSP1P28562 367 aa19.69■□□□□ 0.74
CPNE1-217ENST00000439669 TMEM200BQ69YZ2 307 aa19.69■□□□□ 0.74
CPNE1-217ENST00000439669 RNF144BQ7Z419 303 aa19.69■□□□□ 0.74
CPNE1-217ENST00000439669 OR5D13Q8NGL4 314 aa19.69■□□□□ 0.74
CPNE1-217ENST00000439669 OR52N1Q8NH53 320 aa19.69■□□□□ 0.74
CPNE1-217ENST00000439669 TNFRSF14Q92956 283 aa19.69■□□□□ 0.74
CPNE1-217ENST00000439669 NPFFO15130 113 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms