RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 MED30Q96HR3 178 aa16.16■□□□□ 0.18
SEMA3B-206ENST00000439487 YTHDF1Q9BYJ9 559 aaKnown RBP16.16■□□□□ 0.18
SEMA3B-206ENST00000439487 OR14J1Q9UGF5 321 aa16.16■□□□□ 0.18
SEMA3B-206ENST00000439487 IGHV2-70DA0A0C4DH43 119 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 IGKV1-12A0A0C4DH73 117 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 J3QLI3 93 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 SIGLEC5O15389 551 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 MAGEB3O15480 346 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 IGKV1D-12P01611 117 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 CALCBP10092 127 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 IGFBP3P17936 291 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 PPP3R1P63098 170 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 IL13RA1P78552 427 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 DGUOKQ16854 277 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 LIPKQ5VXJ0 399 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 BTN2A1Q7KYR7 527 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 UFD1Q92890 307 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 EMG1Q92979 244 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 DACT3Q96B18 629 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 DERL3Q96Q80 235 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 NKX3-1Q99801 234 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 NUDT16L1Q9BRJ7 211 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 TMED9Q9BVK6 235 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 ISYNA1Q9NPH2 558 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 RBFOX1Q9NWB1 397 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 METRNQ9UJH8 293 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 MAB21L2Q9Y586 359 aa16.15■□□□□ 0.18
SEMA3B-206ENST00000439487 PIN1P1O15428 100 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 ALDOBP05062 364 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 TMEM225BP0DP42 221 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 PRDX2P32119 198 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 SRP14P37108 136 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 TGFBR2P37173 567 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 ZP1P60852 638 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 GPR50Q13585 617 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 TPBGQ13641 420 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 INSL4Q14641 139 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 TBCEQ15813 527 aaPredicted RBP16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 LRRC10Q5BKY1 277 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 KIAA2026Q5HYC2 2103 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 CD276Q5ZPR3 534 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 BTNL3Q6UXE8 466 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 ZNRF1Q8ND25 227 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 SDSLQ96GA7 329 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 MGLLQ99685 303 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 TMEM138Q9NPI0 162 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 ACOT13Q9NPJ3 140 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 IL36RNQ9UBH0 155 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 OPN4Q9UHM6 478 aa16.14■□□□□ 0.17
SEMA3B-206ENST00000439487 TRAV8-7A0A075B6U6 113 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 KIR2DS1A0A191URI9 304 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 GPX5O75715 221 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 KNG1P01042 644 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 SRD5A1P18405 259 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 ADRA2CP18825 462 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 BDKRB2P30411 391 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 EMX1Q04741 257 aaPredicted RBP16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 PAX8Q06710 450 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 MLLT11Q13015 90 aaPredicted RBP16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 ACSM3Q53FZ2 586 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 DDI2Q5TDH0 399 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 UNQ9370/PRO34162Q6UXP9 181 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 Q8IYB0 196 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 FAM58AQ8N1B3 248 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 MS4A15Q8N5U1 240 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 GPER1Q99527 375 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 NOX4Q9NPH5 578 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 CKLFQ9UBR5 152 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 SLC25A10Q9UBX3 287 aaPredicted RBP16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 AUP1Q9Y679 476 aa16.13■□□□□ 0.17
SEMA3B-206ENST00000439487 MAGEA13PA6NCF6 341 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 GABRPO00591 440 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 ENSAO43768 121 aaKnown RBP16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 MRPS14O60783 128 aaKnown RBP16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 KDM4BO94953 1096 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 FAM157CP0CG43 387 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 CPEP16870 476 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 NDUFB7P17568 137 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 PRKACAP17612 351 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 FSTP19883 344 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 SNU13P55769 128 aaKnown RBP16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 ZNF367Q7RTV3 350 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 C1QL2Q7Z5L3 287 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 SAXO1Q8IYX7 474 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 ZSCAN4Q8NAM6 433 aaPredicted RBP16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 TMEM185AQ8NFB2 350 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 H1FXQ92522 213 aaKnown RBP16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 TMEM203Q969S6 136 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 MRI1Q9BV20 369 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 ELL3Q9HB65 397 aaPredicted RBP16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 FOXJ3Q9UPW0 622 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 LRRC42Q9Y546 428 aa16.12■□□□□ 0.17
SEMA3B-206ENST00000439487 ECDO95905 644 aaPredicted RBP16.11■□□□□ 0.17
SEMA3B-206ENST00000439487 MAS1P04201 325 aa16.11■□□□□ 0.17
SEMA3B-206ENST00000439487 SFTPBP07988 381 aa16.11■□□□□ 0.17
SEMA3B-206ENST00000439487 MAPK3P27361 379 aaPredicted RBP16.11■□□□□ 0.17
SEMA3B-206ENST00000439487 OR3A4PP47883 348 aa16.11■□□□□ 0.17
SEMA3B-206ENST00000439487 CAPZA1P52907 286 aa16.11■□□□□ 0.17
SEMA3B-206ENST00000439487 RPS25P62851 125 aaKnown RBP16.11■□□□□ 0.17
SEMA3B-206ENST00000439487 COL10A1Q03692 680 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms