RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 NKX3-1Q99801 234 aaPredicted RBP6.52□□□□□ -1.37
HMGB2-202ENST00000438704 NEURL2Q9BR09 285 aa6.52□□□□□ -1.37
HMGB2-202ENST00000438704 FGF23Q9GZV9 251 aaPredicted RBP6.52□□□□□ -1.37
HMGB2-202ENST00000438704 DPAGT1Q9H3H5 408 aa6.52□□□□□ -1.37
HMGB2-202ENST00000438704 SLC2A8Q9NY64 477 aa6.52□□□□□ -1.37
HMGB2-202ENST00000438704 TINAGQ9UJW2 476 aa6.52□□□□□ -1.37
HMGB2-202ENST00000438704 PLEKHA6Q9Y2H5 1048 aa6.52□□□□□ -1.37
HMGB2-202ENST00000438704 KCNK7Q9Y2U2 307 aa6.52□□□□□ -1.37
HMGB2-202ENST00000438704 MEMO1Q9Y316 297 aa6.52□□□□□ -1.37
HMGB2-202ENST00000438704 FAM230AA0A1W2PPH8 454 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 C7orf66A4D0T2 115 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 LRP5LA4QPB2 252 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 TMEM235A6NFC5 223 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 C16orf97H3BN30 126 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PFDN1O60925 122 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 CRTAPO75718 401 aaPredicted RBP6.51□□□□□ -1.37
HMGB2-202ENST00000438704 NDUFB6O95139 128 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PTBP3O95758 552 aaKnown RBP6.51□□□□□ -1.37
HMGB2-202ENST00000438704 TCRBP04435 133 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 GLAP06280 429 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 ZNF250P15622 560 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 CCKARP32238 428 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 GLRXP35754 106 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 SRP9P49458 86 aaKnown RBP6.51□□□□□ -1.37
HMGB2-202ENST00000438704 VEGFCP49767 419 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 CASP6P55212 293 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PSG7Q13046 419 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 MEF2DQ14814 521 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 RSU1Q15404 277 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 TSC22D1Q15714 1073 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PCGF3Q3KNV8 242 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 ZNF718Q3SXZ3 478 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 ACTBL2Q562R1 376 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 MKXQ8IYA7 352 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 ACBD4Q8NC06 268 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 OR56B4Q8NH76 319 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 SLC25A40Q8TBP6 338 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 KLF14Q8TD94 323 aaPredicted RBP6.51□□□□□ -1.37
HMGB2-202ENST00000438704 NPRL2Q8WTW4 380 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 GTF3AQ92664 365 aaKnown RBP6.51□□□□□ -1.37
HMGB2-202ENST00000438704 RND1Q92730 232 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 CMBLQ96DG6 245 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 HIST1H2AAQ96QV6 131 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 NICN1Q9BSH3 213 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 CACNG6Q9BXT2 260 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 SELENOIQ9C0D9 397 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 OR2J1Q9GZK6 312 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 TLNRD1Q9H1K6 362 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 OR51I2Q9H344 312 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PLK3Q9H4B4 646 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 IFT22Q9H7X7 185 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 NLKQ9UBE8 527 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PURGQ9UJV8 347 aaKnown RBP6.51□□□□□ -1.37
HMGB2-202ENST00000438704 ING4Q9UNL4 249 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PLCE1Q9P212 2302 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 ATRXP46100 2492 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 PKD1L2Q7Z442 2459 aa6.51□□□□□ -1.37
HMGB2-202ENST00000438704 ACACBO00763 2458 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 BSNQ9UPA5 3926 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 IGLV3-9A0A075B6K5 115 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 A0A0B4J293 547 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 A0A1W2PP11 408 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 A0A1W2PR80 420 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 HMX3A6NHT5 357 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 CEACAM18A8MTB9 384 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 ZNF732B4DXR9 585 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 INMT-MINDY4F8WBC2 141 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 J3QT63 122 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 SOCS1O15524 211 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 SSX5O60225 188 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 PRAF2O60831 178 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 NOS1APO75052 506 aaPredicted RBP6.5□□□□□ -1.37
HMGB2-202ENST00000438704 CYB5AP00167 134 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 CSTBP04080 98 aaKnown RBP6.5□□□□□ -1.37
HMGB2-202ENST00000438704 PTHLHP12272 177 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 BMP5P22003 454 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 DTYMKP23919 212 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 GIFP27352 417 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 CHATP28329 748 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 CALCRP30988 508 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 RBM11P57052 281 aaKnown RBP6.5□□□□□ -1.37
HMGB2-202ENST00000438704 FGF12P61328 243 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 ERVK11-1P61568 191 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 RPS23P62266 143 aaKnown RBP6.5□□□□□ -1.37
HMGB2-202ENST00000438704 MZT1Q08AG7 82 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 IL13RA2Q14627 380 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 DAZAP2Q15038 168 aaPredicted RBP6.5□□□□□ -1.37
HMGB2-202ENST00000438704 SRSF7Q16629 238 aaKnown RBP eCLIP6.5□□□□□ -1.374e-23■■■■■ 30.6
HMGB2-202ENST00000438704 MPV17LQ2QL34 196 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 VAX1Q5SQQ9 334 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 SIGIRRQ6IA17 410 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 OR2T2Q6IF00 324 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 STEAP1BQ6NZ63 245 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 Q6ZS49 121 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 ZNF554Q86TJ5 538 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 FJX1Q86VR8 437 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 HOGA1Q86XE5 327 aa6.5□□□□□ -1.37
HMGB2-202ENST00000438704 CALHM1Q8IU99 346 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms