RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF787Q6DD87 383 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 CLEC9AQ6UXN8 241 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF573Q86YE8 665 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 MRPL41Q8IXM3 137 aaKnown RBP5.89□□□□□ -1.47
CSDE1-205ENST00000438362 LRRC75AQ8NAA5 344 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 LHX4Q969G2 390 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 C10orf35Q96D05 121 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 GFI1Q99684 422 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 SLC26A1Q9H2B4 701 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 PLEKHA3Q9HB20 300 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 G6PC2Q9NQR9 355 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 AMDHD2Q9Y303 409 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 A0A087WV48 116 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 C17orf51A8MQB3 221 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 MS4A18H0YCH9 400 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 HMGB3O15347 200 aaKnown RBP5.89□□□□□ -1.47
CSDE1-205ENST00000438362 TGOLN2O43493 480 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 HLA-HP01893 362 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 CLN3Q13286 438 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 MS4A18Q3C1V0 323 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 LIAT1Q6ZQX7 453 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 LINC00696Q6ZRV3 163 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 OR5C1Q8NGR4 320 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 ISOC2Q96AB3 205 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 CABLES2Q9BTV7 478 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 CHST5Q9GZS9 411 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 TOLLIPQ9H0E2 274 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 WDR13Q9H1Z4 485 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 GAR1Q9NY12 217 aaKnown RBP5.89□□□□□ -1.47
CSDE1-205ENST00000438362 C3orf85A0A1B0GTC6 90 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 A8MXE2 369 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF732B4DXR9 585 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 PPP5D1E7EU14 171 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 CYB5BO43169 146 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 IGKV3-11P04433 115 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 FABP1P07148 127 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 IAPPP10997 89 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 MUC1P15941 1255 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 PRSS12P56730 875 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 FOXL2P58012 376 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 RAB4BP61018 213 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ARG2P78540 354 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 TRIM61Q5EBN2 209 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 SSX9Q7RTT3 188 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF429Q86V71 674 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ADPRHL1Q8NDY3 354 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 FLVCR1-AS1Q8TAF5 88 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 HLA-CQ95604 372 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 TLNRD1Q9H1K6 362 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 UBE2ZQ9H832 354 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 FAM206AQ9NX38 181 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 PPP1R3CQ9UQK1 317 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 FAM166BA8MTA8 275 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 TOX3O15405 576 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ADAM20O43506 726 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ARG1P05089 322 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 PATE4P0C8F1 98 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 DAOP14920 347 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 CD46P15529 392 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 RCC1P18754 421 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 P2RY1P47900 373 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 SULT1A2P50226 295 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 SLC16A13Q7RTY0 426 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 OR13G1Q8NGZ3 307 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 VWCEQ96DN2 955 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 BTF3L4Q96K17 158 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 RAB33BQ9H082 229 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 SLC2A9Q9NRM0 540 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 CASP8AP2Q9UKL3 1982 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PPH5 198 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 MPTX1A8MV57 137 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 SEC11BP0C7V7 166 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 RD3LP0DJH9 198 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 DTYMKP23919 212 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 NPBWR1P48145 328 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 POLR2GP62487 172 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 FOXK1P85037 733 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 PLPPR5Q32ZL2 321 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 WDR74Q6RFH5 385 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 LDLRAD3Q86YD5 345 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 OR5AS1Q8N127 324 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 CNEP1R1Q8N9A8 125 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 OR2M3Q8NG83 312 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 THOC3Q96J01 351 aaKnown RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 RTL8AQ9BWD3 113 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 TMPRSS5Q9H3S3 457 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 TMEM100Q9NV29 134 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 PSENENQ9NZ42 101 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 GNG12Q9UBI6 72 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 POLDIP2Q9Y2S7 368 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 TMEM14DPA8MWL7 114 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF205O95201 554 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 GAPDHP04406 335 aaKnown RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ARR3P36575 388 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 LTC4SQ16873 150 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 C4orf17Q53FE4 359 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 WIPI1Q5MNZ9 446 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 LYZL2Q7Z4W2 148 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 EIF4E3Q8N5X7 224 aaKnown RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF610Q8N9Z0 462 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms