RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 hADV38S2A0JD32 116 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 PQLC2LA1A4F0 135 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 OR2F2O95006 317 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 RPS7P62081 194 aaKnown RBP11.75□□□□□ -0.53
HDAC8-213ENST00000436675 CASC10Q5T4H9 136 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 KCTD18Q6PI47 426 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-213ENST00000436675 CYP2R1Q6VVX0 501 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 OR2W3Q7Z3T1 314 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 OR8H2Q8N162 312 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 KLHL30-AS1Q8NEE0 82 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 CMTM5Q96DZ9 223 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 NOL4LQ96MY1 436 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-213ENST00000436675 NIPSNAP1Q9BPW8 284 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 DPM3Q9P2X0 92 aa11.75□□□□□ -0.53
HDAC8-213ENST00000436675 LSM4Q9Y4Z0 139 aaKnown RBP11.75□□□□□ -0.53
HDAC8-213ENST00000436675 FAM230AA0A1W2PPH8 454 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 IGHA1P01876 353 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 SNRNP70P08621 437 aaKnown RBP11.74□□□□□ -0.53
HDAC8-213ENST00000436675 MRPL3P09001 348 aaKnown RBP11.74□□□□□ -0.53
HDAC8-213ENST00000436675 HSD17B1P14061 328 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 ALOX5APP20292 161 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 LUMP51884 338 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-213ENST00000436675 ERVK11-1P61568 191 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 MEF2CQ06413 473 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-213ENST00000436675 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-213ENST00000436675 MICAQ29983 383 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 CLVS2Q5SYC1 327 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 PRAMEF5Q5TYX0 476 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 TRAPPC6BQ86SZ2 158 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 ABHD12Q8N2K0 398 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 BBS1Q8NFJ9 593 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 MUC7Q8TAX7 377 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 CDRT15Q96T59 188 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 DGCR6LQ9BY27 220 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 PAPOLBQ9NRJ5 636 aaKnown RBP11.74□□□□□ -0.53
HDAC8-213ENST00000436675 LINC00527Q9UJ94 153 aa11.74□□□□□ -0.53
HDAC8-213ENST00000436675 SAMHD1Q9Y3Z3 626 aaKnown RBP11.74□□□□□ -0.53
HDAC8-213ENST00000436675 ACOD1A6NK06 481 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 PRR32B1ATL7 298 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 DHRS3O75911 302 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 IGLV3-1P01715 115 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 GABRR1P24046 479 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 MYCNOSP40205 109 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 GRK1Q15835 563 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 SNAPC1Q16533 368 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 ZBTB49Q6ZSB9 765 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 CPOQ8IVL8 374 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 OR52N4Q8NGI2 321 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 SLAMF9Q96A28 289 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 SNX22Q96L94 193 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 P2RX4Q99571 388 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 IL36RNQ9UBH0 155 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 ZMAT5Q9UDW3 170 aaKnown RBP11.73□□□□□ -0.53
HDAC8-213ENST00000436675 LINC00312Q9Y6C7 94 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 DNAH1Q9P2D7 4330 aa11.73□□□□□ -0.53
HDAC8-213ENST00000436675 H3BSH0 61 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 SASH3O75995 380 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 TTRP02766 147 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 CALCBP10092 127 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 MPZP25189 248 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 DUSP1P28562 367 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 ECI1P42126 302 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 OR3A4PP47883 348 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
HDAC8-213ENST00000436675 GINS1Q14691 196 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 OR10G2Q8NGC3 310 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 CEP19Q96LK0 163 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 LYSTQ99698 3801 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 CADM1Q9BY67 442 aaKnown RBP11.72□□□□□ -0.53
HDAC8-213ENST00000436675 MROQ9BYG7 248 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 REEP1Q9H902 201 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 MTCH1Q9NZJ7 389 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 IKZF2Q9UKS7 526 aa11.72□□□□□ -0.53
HDAC8-213ENST00000436675 LEUTXA8MZ59 168 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 DLGAP1O14490 977 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 MAGEB4O15481 346 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-213ENST00000436675 RAMP3O60896 148 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 ZFPL1O95159 310 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 HAND1O96004 215 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 ATP6V1B2P21281 511 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 PEX2P28328 305 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 GDNFP39905 211 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 ARHGDIBP52566 201 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 IL24Q13007 206 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 APOFQ13790 326 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 RBM39Q14498 530 aaKnown RBP11.71□□□□□ -0.53
HDAC8-213ENST00000436675 ZNF829Q3KNS6 432 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-213ENST00000436675 TMEM42Q69YG0 159 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 PLEKHG7Q6ZR37 379 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 EGFL6Q8IUX8 553 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 PKIBQ9C010 78 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 MYLK2Q9H1R3 596 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 NUFIP1Q9UHK0 495 aaKnown RBP11.71□□□□□ -0.53
HDAC8-213ENST00000436675 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.71□□□□□ -0.53
HDAC8-213ENST00000436675 HHLA2Q9UM44 414 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 COPS3Q9UNS2 423 aa11.71□□□□□ -0.53
HDAC8-213ENST00000436675 ARRDC5A6NEK1 342 aa11.7□□□□□ -0.54
HDAC8-213ENST00000436675 PRODHO43272 600 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms