RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 ATP6V1E1P36543 226 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 VDAC2P45880 294 aaPredicted RBP6.29□□□□□ -1.4
VPS50-203ENST00000436177 CRISP1P54107 249 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 CXCR4P61073 352 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 PRKDCP78527 4128 aaKnown RBP6.29□□□□□ -1.4
VPS50-203ENST00000436177 SLC34A1Q06495 639 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 MFGE8Q08431 387 aaPredicted RBP6.29□□□□□ -1.4
VPS50-203ENST00000436177 EDDM3AQ14507 147 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 ZNF273Q14593 569 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 SSX2Q16385 188 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 SLX4IPQ5VYV7 408 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 HCP5Q6MZN7 132 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 FAM220AQ7Z4H9 259 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 TRAPPC6BQ86SZ2 158 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 CALHM1Q8IU99 346 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 ZDHHC13Q8IUH4 622 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 GID4Q8IVV7 300 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 SLC35F2Q8IXU6 374 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 BATF2Q8N1L9 274 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 YIPF7Q8N8F6 280 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 TRMT10AQ8TBZ6 339 aaKnown RBP6.29□□□□□ -1.4
VPS50-203ENST00000436177 UTP4Q969X6 686 aaKnown RBP6.29□□□□□ -1.4
VPS50-203ENST00000436177 AKR1E2Q96JD6 320 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 CEP19Q96LK0 163 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 OR5M11Q96RB7 305 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 APOL4Q9BPW4 351 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 KRT84Q9NSB2 600 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 GLS2Q9UI32 602 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 OR52A1Q9UKL2 312 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 TCF19Q9Y242 345 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 TBL2Q9Y4P3 447 aaKnown RBP6.29□□□□□ -1.4
VPS50-203ENST00000436177 PCDHGB5Q9Y5G0 923 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 SNX5Q9Y5X3 404 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 R4GMQ9 66 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 hADV38S2A0JD32 116 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 CCDC182A6NF36 153 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 VGLL3A8MV65 326 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 SYT7O43581 403 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 NOS1APO75052 506 aaPredicted RBP6.28□□□□□ -1.4
VPS50-203ENST00000436177 RPP14O95059 124 aaKnown RBP6.28□□□□□ -1.4
VPS50-203ENST00000436177 TTRP02766 147 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 PF4V1P10720 104 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 GABRR1P24046 479 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 MPZP25189 248 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 COL10A1Q03692 680 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 IL24Q13007 206 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 IL18R1Q13478 541 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 ODF4Q2M2E3 257 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 FBLN7Q53RD9 439 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 ZBTB49Q6ZSB9 765 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 MEPCEQ7L2J0 689 aaKnown RBP6.28□□□□□ -1.4
VPS50-203ENST00000436177 KRT74Q7RTS7 529 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 LHFPL4Q7Z7J7 247 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 TMEM179BQ7Z7N9 219 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 ANGPTL5Q86XS5 388 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 NDUFA11Q86Y39 141 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 Q8IYB0 196 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 ENTHD1Q8IYW4 607 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 ELMOD2Q8IZ81 293 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 OR8H2Q8N162 312 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 LYG1Q8N1E2 194 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 CFHR4Q92496 578 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 EMG1Q92979 244 aaKnown RBP6.28□□□□□ -1.4
VPS50-203ENST00000436177 MALSU1Q96EH3 234 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 NRBF2Q96F24 287 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 BORCS8Q96FH0 119 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 ZNF714Q96N38 554 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 PKIBQ9C010 78 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 CLN6Q9NWW5 311 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.28□□□□□ -1.4
VPS50-203ENST00000436177 COPS3Q9UNS2 423 aa6.28□□□□□ -1.4
VPS50-203ENST00000436177 TET2Q6N021 2002 aaPredicted RBP6.28□□□□□ -1.4
VPS50-203ENST00000436177 A0A1W2PRX2 142 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 MEX3AA1L020 520 aaKnown RBP6.27□□□□□ -1.41
VPS50-203ENST00000436177 MEGF11A6BM72 1044 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 A6NIN4 97 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 K7N7A8 449 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 M0R129 80 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 PRKYO43930 277 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 INMTO95050 263 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 CLIC3O95833 236 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 PF4P02776 101 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 PRB2P02812 416 aaPredicted RBP6.27□□□□□ -1.41
VPS50-203ENST00000436177 IGHV1-8P0DP01 117 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 AZGP1P25311 298 aaKnown RBP6.27□□□□□ -1.41
VPS50-203ENST00000436177 PEX2P28328 305 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 ACTA2P62736 377 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 ACTG2P63267 376 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 ACTC1P68032 377 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 ACTA1P68133 377 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 MEF2CQ06413 473 aaPredicted RBP6.27□□□□□ -1.41
VPS50-203ENST00000436177 HABP2Q14520 560 aaPredicted RBP6.27□□□□□ -1.41
VPS50-203ENST00000436177 PTGES3Q15185 160 aaKnown RBP6.27□□□□□ -1.41
VPS50-203ENST00000436177 GRK1Q15835 563 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 KHDC1LQ5JSQ8 128 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 MINOS1Q5TGZ0 78 aa6.27□□□□□ -1.41
VPS50-203ENST00000436177 NXNL2Q5VZ03 156 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms