RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 M1APQ8TC57 530 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 RNF166Q96A37 237 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 MUCL1Q96DR8 90 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 WFIKKN1Q96NZ8 548 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 SOX7Q9BT81 388 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 UBE2J1Q9Y385 318 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 RFNGQ9Y644 331 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 DOCK8Q8NF50 2099 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 TRAV36DV7A0A075B6V5 113 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 C2orf72A6NCS6 295 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 CLDN34H7C241 214 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 M0R143 59 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 DEDDO75618 318 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ZFAND5O76080 213 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ZNF728P0DKX0 622 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 PTGER4P35408 488 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 APLNRP35414 380 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ERVFRD-1P60508 538 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 H3F3AP84243 136 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 PRTGQ2VWP7 1150 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 NPSR1Q6W5P4 371 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ARL6IP6Q8N6S5 226 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 MED29Q9NX70 200 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 IFITM10A6NMD0 228 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 C17orf51A8MQB3 221 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 OR5AC1P0C628 307 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 SMIM10L1P0DMW3 83 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 SFTPDP35247 375 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 PMELP40967 661 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 P2RY1P47900 373 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 GABRA4P48169 554 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 RND3P61587 244 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 CCL20P78556 96 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 HLA-DRB3P79483 266 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ZNF266Q14584 549 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ELOBQ15370 118 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 LBHQ53QV2 105 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 C1orf140Q5VVS0 124 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 CST9LP1Q5W188 147 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ASPHD2Q6ICH7 369 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 LANCL3Q6ZV70 420 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 FAM57BQ71RH2 274 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ATG4DQ86TL0 474 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 RTN4IP1Q8WWV3 396 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 SLAMF6Q96DU3 332 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 SMIM10Q96HG1 83 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 GNRHR2Q96P88 292 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 ABHD14AQ9BUJ0 271 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 PBOV1Q9GZY1 135 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 GOLT1BQ9Y3E0 138 aa6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 PTRH2Q9Y3E5 179 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 PTPRZ1P23471 2315 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-203ENST00000434046 FAM186AA6NE01 2351 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 A0A1W2PPQ1 181 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 CEBPZOSA8MTT3 80 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 PPP5D1E7EU14 171 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 EREGO14944 169 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 FOXS1O43638 330 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 SSSCA1O60232 199 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 MBPP02686 304 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 CTSBP07858 339 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 EPHA1P21709 976 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 CD200P41217 278 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 RPS4XP62701 263 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 SUPT4H1P63272 117 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 INSM1Q01101 510 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 ZNF141Q15928 474 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 C1orf100Q5SVJ3 147 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TMEM164Q5U3C3 297 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 FAM166AQ6J272 317 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 ZNF574Q6ZN55 896 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 LGI3Q8N145 548 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 DTD1Q8TEA8 209 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 PIGTQ969N2 578 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 MALSU1Q96EH3 234 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 PGAM5Q96HS1 289 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 GPX7Q96SL4 187 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 GPR84Q9NQS5 396 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TUBG2Q9NRH3 451 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TMED7-TICAM2A0A0A6YYA0 188 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 CDC14BO60729 498 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 IFNA5P01569 189 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 HLA-HP01893 362 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 HPNP05981 417 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 OR5H8P0DN80 308 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 EDN3P14138 238 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 CSRP1P21291 193 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 ERVS71-1P61550 626 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TRIM61Q5EBN2 209 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 CDCP2Q5VXM1 449 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 WDR25Q64LD2 544 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 LINC00114Q6XXX2 140 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 OR1L3Q8NH93 324 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 VSTM2LQ96N03 204 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 HIST1H2BLQ99880 126 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms