RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 PIGPP57054 158 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDX56-205ENST00000433257 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 RSU1Q15404 277 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 HIST2H3PS2Q5TEC6 136 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 ANKRD37Q7Z713 158 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 NFAM1Q8NET5 270 aaPredicted RBP12.9□□□□□ -0.34
DDX56-205ENST00000433257 C18orf12Q96KH6 178 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 TECTBQ96PL2 329 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 SLC25A31Q9H0C2 315 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 SIRT7Q9NRC8 400 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 ZNF292O60281 2723 aa12.9□□□□□ -0.34
DDX56-205ENST00000433257 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 NSG1A0A0A6YYJ2 146 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 RER1O15258 196 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 MBPP02686 304 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 HEXBP07686 556 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 SFTPDP35247 375 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 RHBDD2Q6NTF9 364 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 FBXW12Q6X9E4 464 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 SLC25A45Q8N413 288 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 LINC00469Q8N7U9 141 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 SUMF2Q8NBJ7 301 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 APCDD1LQ8NCL9 501 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 MARS2Q96GW9 593 aaKnown RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 DUSP23Q9BVJ7 150 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 SCRT1Q9BWW7 348 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 METTL7AQ9H8H3 244 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 C19orf25Q9UFG5 118 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 DMRT1Q9Y5R6 373 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 B3GALT1Q9Y5Z6 326 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 A0A1W2PP11 408 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 C9JQL5 133 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 ZFAND5O76080 213 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 SCGB1D2O95969 90 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 F10P00742 488 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 HBE1P02100 147 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 CD59P13987 128 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 OTX1P32242 354 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 CSNK1A1P48729 337 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 RSPO4Q2I0M5 234 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 WDR74Q6RFH5 385 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 LHFPL2Q6ZUX7 228 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 WDSUB1Q8N9V3 476 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 RTN4IP1Q8WWV3 396 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 ZNF501Q96CX3 271 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 GNPNAT1Q96EK6 184 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 NAA11Q9BSU3 229 aaPredicted RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 HIPK2Q9H2X6 1198 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 ZNF286AQ9HBT8 521 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 IL36GQ9NZH8 169 aa12.89□□□□□ -0.35
DDX56-205ENST00000433257 NOSIPQ9Y314 301 aaKnown RBP12.89□□□□□ -0.35
DDX56-205ENST00000433257 ZNF850A8MQ14 1090 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 FBP1P09467 338 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 TMEM225BP0DP42 221 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 SLC2A1P11166 492 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 EFNA3P52797 238 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 AKIRIN2Q53H80 203 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 ASCL4Q6XD76 172 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 LANCL3Q6ZV70 420 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 WDFY1Q8IWB7 410 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 OR13D1Q8NGV5 346 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 POC1BQ8TC44 478 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 TMEM54Q969K7 222 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 NUDT22Q9BRQ3 303 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 ELL3Q9HB65 397 aaPredicted RBP12.88□□□□□ -0.35
DDX56-205ENST00000433257 ZNF319Q9P2F9 582 aa12.88□□□□□ -0.35
DDX56-205ENST00000433257 A0A1W2PPH5 198 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 LINC00587B1AMM8 73 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 B4DEV8 164 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 TP53I11O14683 189 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 NME2P1O60361 137 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 PITX3O75364 302 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 DEFB133Q30KQ1 61 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 HIKESHIQ53FT3 197 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 SLC16A13Q7RTY0 426 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 OR2M3Q8NG83 312 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 OR14L1PQ8NHC6 308 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 RBMXL1Q96E39 390 aaKnown RBP12.87□□□□□ -0.35
DDX56-205ENST00000433257 PIGQQ9BRB3 760 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 SMIM3Q9BZL3 60 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 FGF21Q9NSA1 209 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 KIAA1456Q9P272 454 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 PIGLQ9Y2B2 252 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 TDRD6O60522 2096 aaKnown RBP12.87□□□□□ -0.35
DDX56-205ENST00000433257 GVINP1Q7Z2Y8 2422 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 PHF3Q92576 2039 aaKnown RBP12.87□□□□□ -0.35
DDX56-205ENST00000433257 CABIN1Q9Y6J0 2220 aa12.87□□□□□ -0.35
DDX56-205ENST00000433257 TRBV11-1A0A0K0K1C0 115 aa12.86□□□□□ -0.35
DDX56-205ENST00000433257 A6NLC8 198 aa12.86□□□□□ -0.35
DDX56-205ENST00000433257 K7N7A8 449 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms