RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 NHLRC3Q5JS37 347 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 LYSMD2Q8IV50 215 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 Q8IYB0 196 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 SMIM4Q8WVI0 70 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 GTF3AQ92664 365 aaKnown RBP15.45■□□□□ 0.06
HMGN1-206ENST00000431390 NEUROG1Q92886 237 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 HS3ST6Q96QI5 342 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 DIRC2Q96SL1 478 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 ISPDA4D126 451 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 GABARAPH6UMI1 98 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 GRPP07492 148 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 NPBWR2P48146 333 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 FGF12P61328 243 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 STEAP3Q658P3 488 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 LILRB1Q8NHL6 650 aaPredicted RBP15.45■□□□□ 0.06
HMGN1-206ENST00000431390 DHRS9Q9BPW9 319 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 AUNIPQ9H7T9 357 aa15.45■□□□□ 0.06
HMGN1-206ENST00000431390 CISD1Q9NZ45 108 aaKnown RBP15.45■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A10PA6NDY2 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A18PA6NE21 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A16PA6NEW6 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A20PA6NIJ5 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A8PA6NJQ4 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A7PA6NKC0 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FOXI3A8MTJ6 420 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A22PA8MWA6 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A12PA8MX19 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A5PA8MXJ8 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A23PA8MXZ1 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 CDIPTO14735 213 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 SPRY3O43610 288 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 NOS1APO75052 506 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-206ENST00000431390 RHBDL1O75783 438 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A15PP0C7V4 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A13PP0C7W8 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A14PP0C7W9 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FAM90A24PP0C7X0 464 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 TNFSF4P23510 183 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 SSTR2P30874 369 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 SRP9P49458 86 aaKnown RBP15.44■□□□□ 0.06
HMGN1-206ENST00000431390 RBM11P57052 281 aaKnown RBP15.44■□□□□ 0.06
HMGN1-206ENST00000431390 TESK1Q15569 626 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 ZNF260Q3ZCT1 412 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 HACD4Q5VWC8 232 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 TRIQKQ629K1 86 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 DNM1P46Q6ZS02 220 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 C11orf53Q8IXP5 236 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 FBXL14Q8N1E6 418 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 THAP7Q9BT49 309 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-206ENST00000431390 IL19Q9UHD0 177 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 ST3GAL6Q9Y274 331 aa15.44■□□□□ 0.06
HMGN1-206ENST00000431390 TACC2O95359 2948 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 B9A039 149 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 M0R233 179 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 SOCS1O15524 211 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 IGHV1-46P01743 117 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 PGA5P0DJD9 388 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 DGCR2P98153 550 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 SCN1BQ07699 218 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 ARL6IP1Q15041 203 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 PRAMEF6Q5VXH4 476 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 CHST4Q8NCG5 386 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 YIPF5Q969M3 257 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 TRIM63Q969Q1 353 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 RAB3CQ96E17 227 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 MEGF10Q96KG7 1140 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 OR2V2Q96R30 315 aa15.43■□□□□ 0.06
HMGN1-206ENST00000431390 RBFOX1Q9NWB1 397 aaKnown RBP15.43■□□□□ 0.06
HMGN1-206ENST00000431390 A0A1W2PQ09 198 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 A6NLC8 198 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 C17orf100A8MU93 164 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 SULT1C2O00338 296 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 GOSR1O95249 250 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 CD55P08174 381 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 MELTFP08582 738 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 GSTP1P09211 210 aaKnown RBP15.42■□□□□ 0.06
HMGN1-206ENST00000431390 HIST1H1DP16402 221 aaKnown RBP15.42■□□□□ 0.06
HMGN1-206ENST00000431390 PRSS3P35030 304 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 GATA4P43694 442 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 TMEM50BP56557 158 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 ERVK11-1P61568 191 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 DAZAP2Q15038 168 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-206ENST00000431390 PIGYQ3MUY2 71 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 LINC00596Q86U02 117 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 POC1AQ8NBT0 407 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 FCAMRQ8WWV6 532 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 NRIP2Q9BQI9 281 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 SCPEP1Q9HB40 452 aa15.42■□□□□ 0.06
HMGN1-206ENST00000431390 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.42■□□□□ 0.06
HMGN1-206ENST00000431390 ZFHX3Q15911 3703 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 F8VVB4 439 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 F8VWA3 439 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 BLVRBP30043 206 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 CHD3Q12873 2000 aaKnown RBP15.41■□□□□ 0.06
HMGN1-206ENST00000431390 MPPED2Q15777 294 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 TAF9Q16594 264 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 CDNFQ49AH0 187 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 WDR82Q6UXN9 313 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 Q6ZTK2 550 aa15.41■□□□□ 0.06
HMGN1-206ENST00000431390 FAM58AQ8N1B3 248 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms