RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TSPOP30536 169 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 SNRPD1P62314 119 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 C5orf64Q2M2E5 130 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 CCSMST1Q4G0I0 132 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 WDR25Q64LD2 544 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 PLXDC2Q6UX71 529 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 TMEM64Q6YI46 380 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF550Q7Z398 422 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 WFDC8Q8IUA0 241 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 WFDC5Q8TCV5 224 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 OVCA2Q8WZ82 227 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 PLD4Q96BZ4 506 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 ALG14Q96F25 216 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 HDAC8Q9BY41 377 aa7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF703Q9H7S9 590 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZCCHC3Q9NUD5 404 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 CISD1Q9NZ45 108 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 MRM2Q9UI43 246 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-206ENST00000429440 IGHV2-26A0A0B4J1V2 119 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 IGLC7A0M8Q6 106 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 TSPAN6O43657 245 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 DDAH2O95865 285 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 CD55P08174 381 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 PPIAL4GP0DN37 164 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 SRP14P37108 136 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 HINT1P49773 126 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 MTCP1P56278 107 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 CLDN6P56747 220 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF117Q03924 483 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF266Q14584 549 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 AGERQ15109 404 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 C9orf135Q5VTT2 229 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 CST9LP1Q5W188 147 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 OR4C11Q6IEV9 310 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.78□□□□□ -1.167e-9■■■□□ 16.2
CDC42BPA-206ENST00000429440 LRRC69Q6ZNQ3 347 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 C16orf82Q7Z2V1 217 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 ABHD12BQ7Z5M8 362 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 LINC01555Q8NAE3 123 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 OR2G3Q8NGZ4 309 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 OR2T10Q8NGZ9 312 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 FNDC9Q8TBE3 224 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 RTBDNQ9BSG5 229 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 CFHR5Q9BXR6 569 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 C20orf141Q9NUB4 165 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 IGLV3-16A0A075B6K0 115 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 MED19A0JLT2 244 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 H7BYZ3 331 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 LAMP2P13473 410 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 VASPP50552 380 aaPredicted RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 C17orf67Q0P5P2 114 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 NOGQ13253 232 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 SHBQ15464 509 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 TRMT12Q53H54 448 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 LRRC73Q5JTD7 316 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 VASH2Q86V25 355 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF676Q8N7Q3 588 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 OR52R1Q8NGF1 315 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 OR52E2Q8NGJ4 325 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 OR1K1Q8NGR3 316 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 RASD2Q96D21 266 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 AGMATQ9BSE5 352 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZMAT3Q9HA38 289 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF586Q9NXT0 402 aa7.78□□□□□ -1.16
CDC42BPA-206ENST00000429440 A0A087WV48 116 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZNF891A8MT65 544 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 TRAPPC2LH3BP13 241 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 NUPR1O60356 82 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 CXCL10P02778 98 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 CRYGCP07315 174 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 MMP9P14780 707 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZNF10P21506 573 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 TUBG1P23258 451 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 CRYBA4P53673 196 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 RPL15P61313 204 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 SRPXP78539 464 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 FAM78AQ5JUQ0 283 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 TMEM144Q7Z5S9 345 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 DEFB128Q7Z7B8 93 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 SAXO1Q8IYX7 474 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 CSNK1A1LQ8N752 337 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 GVQW1Q8N7I0 195 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 TCTEX1D1Q8N7M0 179 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 ASB10Q8WXI3 467 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 GLYATL1Q969I3 302 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 UBE2E3Q969T4 207 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZG16BQ96DA0 208 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 ANAPC16Q96DE5 110 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 SLC46A1Q96NT5 459 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 LPAR5Q9H1C0 372 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 PLEK2Q9NYT0 353 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 NAT8Q9UHE5 227 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 LSM5Q9Y4Y9 91 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 PRR32B1ATL7 298 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 ABHD16AO95870 558 aa7.77□□□□□ -1.17
CDC42BPA-206ENST00000429440 B4GALNT1Q00973 533 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms