RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SLC5A7Q9GZV3 580 aa9.99□□□□□ -0.81
CECR3-201ENST00000428828 MED31Q9Y3C7 131 aa9.99□□□□□ -0.81
CECR3-201ENST00000428828 SMCO3A2RU48 225 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 A8MVM7 634 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 DOK2O60496 412 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BKO60814 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BJP06899 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 MRPL3P09001 348 aaKnown RBP9.98□□□□□ -0.81
CECR3-201ENST00000428828 FUT1P19526 365 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BOP23527 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BBP33778 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 RPS10P46783 165 aaKnown RBP9.98□□□□□ -0.81
CECR3-201ENST00000428828 ZNF84P51523 738 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 CLDN12P56749 244 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BDP58876 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BCP62807 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 NKX6-1P78426 367 aaPredicted RBP9.98□□□□□ -0.81
CECR3-201ENST00000428828 FAM3AP98173 230 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST2H2BEQ16778 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 TMEM176BQ3YBM2 270 aaPredicted RBP9.98□□□□□ -0.81
CECR3-201ENST00000428828 AARDQ4LEZ3 155 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.98□□□□□ -0.81
CECR3-201ENST00000428828 TMEM268Q5VZI3 342 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 LINC00114Q6XXX2 140 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 LRRC18Q8N456 261 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BHQ93079 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BNQ99877 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 HIST1H2BMQ99879 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 OR51V1Q9H2C8 321 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 PRO1933Q9H354 126 aa9.98□□□□□ -0.81
CECR3-201ENST00000428828 MRPS18CQ9Y3D5 142 aaKnown RBP9.98□□□□□ -0.81
CECR3-201ENST00000428828 TRDCB7Z8K6 153 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 M0R143 59 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 TNFSF11O14788 317 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 CST4P01036 141 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 PET100P0DJ07 73 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 ADRA2CP18825 462 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 AQP2P41181 271 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 CD200P41217 278 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 C1orf140Q5VVS0 124 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 ARHGAP11AQ6P4F7 1023 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 CDK20Q8IZL9 346 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 ZNF417Q8TAU3 575 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 DTD1Q8TEA8 209 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 RCC1LQ96I51 464 aaKnown RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 ZNF385AQ96PM9 386 aaKnown RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 PDCD1LG2Q9BQ51 273 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SLC35B3Q9H1N7 401 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SPACA1Q9HBV2 294 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SPRR3Q9UBC9 169 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 ARHGAP21Q5T5U3 1957 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SPTA1P02549 2419 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 TRBV5-7A0A0A0MS05 114 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 A0A1B0GTH9 108 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 A0A1W2PPE2 198 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 UMAD1C9J7I0 102 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 CCSO14618 274 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 AHSA1O95433 338 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 AMY2AP04746 511 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SOD3P08294 240 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 TMIGD3P0DMS9 266 aaPredicted RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 EDN3P14138 238 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 LMO1P25800 156 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 TAS2R31P59538 309 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 MRPS11P82912 194 aaKnown RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 MYBPHQ13203 477 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 GUK1Q16774 197 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 GXYLT1Q4G148 440 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SLC35F2Q8IXU6 374 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 OR4K15Q8NH41 348 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SLC25A43Q8WUT9 341 aaPredicted RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 RGP1Q92546 391 aaPredicted RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 TAAR8Q969N4 342 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 BPIFA2Q96DR5 249 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SEH1LQ96EE3 360 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 RRNAD1Q96FB5 475 aaKnown RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 PACRGQ96M98 296 aaPredicted RBP9.97□□□□□ -0.81
CECR3-201ENST00000428828 TAF9BQ9HBM6 251 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 FBXO7Q9Y3I1 522 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 KALRNO60229 2985 aa9.97□□□□□ -0.81
CECR3-201ENST00000428828 SHANK1Q9Y566 2161 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 TRAV36DV7A0A075B6V5 113 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 TRAV18A0A075B6X5 111 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 NPIPA2E9PIF3 369 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 NPIPA3F8WFD2 350 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 DCTN6O00399 190 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 GCGP01275 180 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 CSTBP04080 98 aaKnown RBP9.96□□□□□ -0.81
CECR3-201ENST00000428828 ARG1P05089 322 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 OR5AC1P0C628 307 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 MAKP20794 623 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 LHX2P50458 406 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 SUCLG1P53597 346 aaKnown RBP9.96□□□□□ -0.81
CECR3-201ENST00000428828 SLC16A1P53985 500 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 IL13RA1P78552 427 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 DLK1P80370 383 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 CLINT1Q14677 625 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 AKR1C8PQ5T2L2 129 aa9.96□□□□□ -0.81
CECR3-201ENST00000428828 CYB5R2Q6BCY4 276 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms