RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MRGPRDQ8TDS7 321 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 VSTM2LQ96N03 204 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 OR5B12Q96R08 314 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 OR10A2Q9H208 303 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 SERINC1Q9NRX5 453 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 LRIT1Q9P2V4 623 aa14.08□□□□□ -0.15
C9orf3-206ENST00000428313 FAM221AA4D161 298 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 LINC01553A4QN01 128 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 NXPH2O95156 264 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 SLC35E2P0CK97 266 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 CNN1P51911 297 aaKnown RBP14.08□□□□□ -0.16
C9orf3-206ENST00000428313 NFATC4Q14934 902 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 LIAT1Q6ZQX7 453 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 LYZL2Q7Z4W2 148 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 CISD2Q8N5K1 135 aaKnown RBP14.08□□□□□ -0.16
C9orf3-206ENST00000428313 MS4A10Q96PG2 267 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 AGMATQ9BSE5 352 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 BANF2Q9H503 90 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 FOXJ2Q9P0K8 574 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 NAT8Q9UHE5 227 aa14.08□□□□□ -0.16
C9orf3-206ENST00000428313 CHTOPQ9Y3Y2 248 aaKnown RBP14.08□□□□□ -0.16
C9orf3-206ENST00000428313 IGSF23A1L1A6 192 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 FOXI3A8MTJ6 420 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-206ENST00000428313 SERPINE3A8MV23 424 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 CD55P08174 381 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 GZMHP20718 246 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 PIGPP57054 158 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 SHHQ15465 462 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 TMEM183BQ1AE95 376 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 AGBL4Q5VU57 503 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 TMEM123Q8N131 208 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 DAZLQ92904 295 aaKnown RBP14.07□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF845Q96IR2 970 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-206ENST00000428313 SLC35E1Q96K37 410 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 SLC46A2Q9BY10 475 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 VN1R1Q9GZP7 353 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 PLEKHF2Q9H8W4 249 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 FAM206AQ9NX38 181 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 GNG13Q9P2W3 67 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 SLC7A11Q9UPY5 501 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 FUT9Q9Y231 359 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 SCDO00767 359 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 TTRP02766 147 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 GALR1P47211 349 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 ASCL1P50553 236 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 GNB2P62879 340 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 WDR25Q64LD2 544 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-206ENST00000428313 FBXO42Q6P3S6 717 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 RTL10Q7L3V2 364 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 LGI3Q8N145 548 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 SLC24A4Q8NFF2 622 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 OR4C3Q8NH37 302 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 TMEM37Q8WXS4 190 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 TP53RKQ96S44 253 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 TIMM29Q9BSF4 260 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 RBKSQ9H477 322 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 OR6C3Q9NZP0 311 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 B3GAT1Q9P2W7 334 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 CCL26Q9Y258 94 aa14.07□□□□□ -0.16
C9orf3-206ENST00000428313 MAP1LC3B2A6NCE7 125 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 FAM24AA6NFZ4 105 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF878C9JN71 531 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 YPEL1O60688 119 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 HRASP01112 189 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF41P51814 821 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-206ENST00000428313 UBE2NP61088 152 aaKnown RBP14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ACKR1Q16570 336 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ETFRF1Q6IPR1 90 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 DGAT2L6Q6ZPD8 337 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 IFI44Q8TCB0 444 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 YPEL2Q96QA6 119 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 OR2A5Q96R48 311 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 MAP1LC3BQ9GZQ8 125 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 PILRAQ9UKJ1 303 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 HPNP05981 417 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF823P16415 610 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF20P17024 532 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 TMEM11P17152 192 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 TUBG1P23258 451 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 OR3A4PP47883 348 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF157P51786 506 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ERVS71-1P61550 626 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 BATFQ16520 125 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 FNDC7Q5VTL7 733 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 CYP2G1PQ6ZSU1 146 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 FAM160A2Q8N612 972 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-206ENST00000428313 TMEM171Q8WVE6 324 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 DNAJA3Q96EY1 480 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 ELOVL1Q9BW60 279 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 TXNIPQ9H3M7 391 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 PLK3Q9H4B4 646 aa14.06□□□□□ -0.16
C9orf3-206ENST00000428313 A0A1W2PRU2 124 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 C11orf98E9PRG8 122 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 H7BYZ3 331 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-206ENST00000428313 PPBPP02775 128 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 MMP9P14780 707 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 PTTG1IPP53801 180 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 ZNF92Q03936 586 aa14.05□□□□□ -0.16
C9orf3-206ENST00000428313 ENDOGQ14249 297 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms