RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 FGF5P12034 268 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 ZNF32P17041 273 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 TUBG1P23258 451 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 GTF3C1Q12789 2109 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 CEACAM16Q2WEN9 425 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 C1orf100Q5SVJ3 147 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 RAB11FIP2Q7L804 512 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 ABHD3Q8WU67 409 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 OXGR1Q96P68 337 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 C12orf49Q9H741 205 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 A0A1W2PPH5 198 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 HLA-HP01893 362 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 CSRP1P21291 193 aaKnown RBP11.68□□□□□ -0.54
USP42-203ENST00000426246 BMP5P22003 454 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 ACKR3P25106 362 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 GLP1RP43220 463 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 EIF5AL1Q6IS14 154 aaKnown RBP11.68□□□□□ -0.54
USP42-203ENST00000426246 RPS19BP1Q86WX3 136 aaKnown RBP11.68□□□□□ -0.54
USP42-203ENST00000426246 HOGA1Q86XE5 327 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
USP42-203ENST00000426246 LIPHQ8WWY8 451 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 SPTSSAQ969W0 71 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 ARRDC1-AS1Q9H2J1 176 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 PURGQ9UJV8 347 aaKnown RBP11.68□□□□□ -0.54
USP42-203ENST00000426246 GPR132Q9UNW8 380 aa11.68□□□□□ -0.54
USP42-203ENST00000426246 MED13Q9UHV7 2174 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 A0A1W2PPE2 198 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 C9JQL5 133 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 ZNF883P0CG24 379 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 POLR2GP62487 172 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP42-203ENST00000426246 NCMAPQ5T1S8 102 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 AVPI1Q5T686 147 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 LPCAT3Q6P1A2 487 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 TMEM123Q8N131 208 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 CCNL2Q96S94 520 aaPredicted RBP11.67□□□□□ -0.54
USP42-203ENST00000426246 SLC17A5Q9NRA2 495 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 AK3Q9UIJ7 227 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 CCDC187A0A096LP49 1063 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 LNP1A1A4G5 178 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 PET100P0DJ07 73 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 ACP1P24666 158 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 SUPT4H1P63272 117 aaKnown RBP11.67□□□□□ -0.54
USP42-203ENST00000426246 LTC4SQ16873 150 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 IGSF11Q5DX21 431 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 ZDHHC22Q8N966 263 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 WDSUB1Q8N9V3 476 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 SPSB2Q99619 263 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 RTBDNQ9BSG5 229 aaPredicted RBP11.67□□□□□ -0.54
USP42-203ENST00000426246 ALX4Q9H161 411 aaPredicted RBP11.67□□□□□ -0.54
USP42-203ENST00000426246 KCNJ16Q9NPI9 418 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 C1orf123Q9NWV4 160 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 C19orf25Q9UFG5 118 aaPredicted RBP11.67□□□□□ -0.54
USP42-203ENST00000426246 KCNS2Q9ULS6 477 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 A0A0G2JMM0 328 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 A0A1W2PPB8 328 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 A0A1W2PRS3 328 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 KIR3DP1A8MWS1 328 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 RUNX1Q01196 453 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 PJVKQ0ZLH3 352 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 MRGPRX4Q96LA9 322 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 METTL9Q9H1A3 318 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 SLC26A1Q9H2B4 701 aa11.67□□□□□ -0.54
USP42-203ENST00000426246 A0A0J9YW62 118 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 CD74P04233 296 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 CARD18P57730 90 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 MRPL14Q6P1L8 145 aaKnown RBP11.66□□□□□ -0.54
USP42-203ENST00000426246 ZNF529Q6P280 563 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.66□□□□□ -0.54
USP42-203ENST00000426246 ZNF695Q8IW36 515 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 OR9K2Q8NGE7 335 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 OR52M1Q8NGK5 317 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 KIRREL1Q96J84 757 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 IL36RNQ9UBH0 155 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 ZNF727A8MUV8 499 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 TAS2R46P59540 309 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 GNMTQ14749 295 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 USF3Q68DE3 2245 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 LYZL4Q96KX0 146 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 ABHD14AQ9BUJ0 271 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 PLA2G3Q9NZ20 509 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 LPAR3Q9UBY5 353 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 AUP1Q9Y679 476 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 A0A1W2PQD3 144 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 ZNF98A6NK75 572 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 TMEM14DPA8MWL7 114 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 C1orf196B1AJZ1 125 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 P04436 131 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 TCN2P20062 427 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 NPBWR2P48146 333 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 SLC35A1P78382 337 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 DHODHQ02127 395 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 GPR157Q5UAW9 335 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms