RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	SPNS3	Q6ZMD2	512 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	CSNK2A3	Q8NEV1	391 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	STOML3	Q8TAV4	291 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	OPA3	Q9H6K4	179 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	TREM1	Q9NP99	234 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	DOCK7	Q96N67	2140 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	LOC102723996	A0A087X1L8	192 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	TRBV6-7	A0A0A0MS04	114 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	IGKV1-9	A0A0C4DH69	117 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	CYC1	P08574	325 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	LIF	P15018	202 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	ZNF84	P51523	738 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	PDZK1IP1	Q13113	114 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	SLC30A7	Q8NEW0	376 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR2Y1	Q8NGV0	311 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR5H2	Q8NGV7	314 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR14L1P	Q8NHC6	308 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	TERB2	Q8NHR7	220 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	IMMP1L	Q96LU5	166 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	NELFA	Q9H3P2	528 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	PLA2G2E	Q9NZK7	142 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	GPR132	Q9UNW8	380 aa		11.36	□□□□□ -0.59
COL12A1-205	ENST00000425443	KLF7	O75840	302 aa	Predicted RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443		P04436	131 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	RCC1	P18754	421 aa	Predicted RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	BLVRB	P30043	206 aa	Predicted RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	ID4	P47928	161 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	BRICD5	Q6PL45	260 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	WDR5B	Q86VZ2	330 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	BAP18	Q8IXM2	172 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR13G1	Q8NGZ3	307 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	M1AP	Q8TC57	530 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	TCTEX1D2	Q8WW35	142 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	ANGPTL4	Q9BY76	406 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	PARP12	Q9H0J9	701 aa	Known RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	ZNF700	Q9H0M5	742 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	EHF	Q9NZC4	300 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	B3GALT1	Q9Y5Z6	326 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	ASPM	Q8IZT6	3477 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	UBE2C	O00762	179 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	TRAPPC6A	O75865	159 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	VAMP5	O95183	116 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	GSK3A	P49840	483 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	AIMP2	Q13155	320 aa	Known RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	AADACL3	Q5VUY0	350 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	CDCP2	Q5VXM1	449 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	YRDC	Q86U90	279 aa	Known RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DTWD2	Q8NBA8	298 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	FAHD2A	Q96GK7	314 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	NMES1	Q9C002	83 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443		A0A1B0GW55	424 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DHH	O43323	396 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DKK1	O94907	266 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	F10	P00742	488 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DUX4L2	P0CJ85	424 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DUX4L3	P0CJ86	424 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DUX4L4	P0CJ87	422 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DUX4L5	P0CJ88	424 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DUX4L6	P0CJ89	424 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DUX4L7	P0CJ90	424 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	FCGR2A	P12318	317 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	HIST1H1D	P16402	221 aa	Known RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	RPS18	P62269	152 aa	Known RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	BLOC1S1	P78537	153 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	RAB32	Q13637	225 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	TMEM128	Q5BJH2	165 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	C10orf91	Q5T1B1	145 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR9K2	Q8NGE7	335 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR56B2P	Q8NGI1	322 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR56B1	Q8NGI3	324 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	PNRC2	Q9NPJ4	139 aa	Known RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	DUX4	Q9UBX2	424 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	COLQ	Q9Y215	455 aa	Predicted RBP	11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	TP53TG5	Q9Y2B4	290 aa		11.35	□□□□□ -0.59
COL12A1-205	ENST00000425443	IGKV1D-8	A0A087WSZ0	117 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	ANGPTL7	O43827	346 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	CBR3	O75828	277 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	PATE4	P0C8F1	98 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	SNU13	P55769	128 aa	Known RBP	11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	LSM6	P62312	80 aa	Known RBP	11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	RNF151	Q2KHN1	245 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	ZNF585A	Q6P3V2	769 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	UQCC3	Q6UW78	93 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	TMEM108	Q6UXF1	575 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	OR2AE1	Q8NHA4	323 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	PRO3102	Q9H379	93 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	HRH4	Q9H3N8	390 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	ANAPC10	Q9UM13	185 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	FAM221A	A4D161	298 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443		C9JQL5	133 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	PDCD1	Q15116	288 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	HIST3H3	Q16695	136 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	PYY3	Q5JQD4	70 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	PHYHD1	Q5SRE7	291 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	H3F3C	Q6NXT2	135 aa		11.34	□□□□□ -0.59
COL12A1-205	ENST00000425443	C6orf201	Q7Z4U5	140 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms