RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SIRT4Q9Y6E7 314 aaPredicted RBP18.42■□□□□ 0.54
PTCHD3P2-201ENST00000424937 A0A1W2PQ09 198 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 SPRY1O43609 319 aaPredicted RBP18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 SULT1B1O43704 296 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 MT-ND2P03891 347 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 PARP16Q8N5Y8 322 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 SIGLECL1Q8N7X8 197 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 OR5D18Q8NGL1 313 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 OR5D14Q8NGL3 314 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 GPR148Q8TDV2 347 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 EMG1Q92979 244 aaKnown RBP18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 SMIM19Q96E16 107 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 JMJD8Q96S16 334 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 NEK6Q9HC98 313 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 KPTNQ9Y664 436 aa18.41■□□□□ 0.54
PTCHD3P2-201ENST00000424937 MYL12BO14950 172 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 HCKP08631 526 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 PDCD1Q15116 288 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 RUSC1-AS1Q66K80 236 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 RBMS3Q6XE24 437 aaKnown RBP18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 VMO1Q7Z5L0 202 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 Q8IYB0 196 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 CMTM4Q8IZR5 234 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 KIR3DL3Q8N743 410 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 ZFP41Q8N8Y5 198 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 LHX4Q969G2 390 aa18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 RBFOX1Q9NWB1 397 aaKnown RBP18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 SOX21Q9Y651 276 aaPredicted RBP18.4■□□□□ 0.54
PTCHD3P2-201ENST00000424937 OGG1O15527 345 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ANGPTL7O43827 346 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 CD2P06729 351 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 BCL3P20749 454 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 C21orf33P30042 268 aaPredicted RBP18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 NPBWR2P48146 333 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 IZUMO2Q6UXV1 221 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 C9orf139Q6ZV77 190 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 RNF144BQ7Z419 303 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 FAM185AQ8N0U4 392 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ZNF485Q8NCK3 441 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DMRTB1Q96MA1 342 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ZNF48Q96MX3 618 aaPredicted RBP18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ESM1Q9NQ30 184 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 SIRT7Q9NRC8 400 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 FKBP14Q9NWM8 211 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TAS2R4Q9NYW5 299 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 IL36RNQ9UBH0 155 aa18.39■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TRBV23-1A0A0A0MS06 115 aa18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 COL10A1Q03692 680 aa18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PDZK1IP1Q13113 114 aa18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TUSC1Q2TAM9 212 aa18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 C6orf141Q5SZD1 244 aa18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DMKNQ6E0U4 476 aaPredicted RBP18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 FIP1L1Q6UN15 594 aaKnown RBP18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ASCC1Q8N9N2 400 aaKnown RBP18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 OR13C5Q8NGS8 318 aa18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ZNF281Q9Y2X9 895 aa18.38■□□□□ 0.53
PTCHD3P2-201ENST00000424937 CENPVL3A0A0U1RRI6 287 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PNMA8CA0A1B0GUJ8 204 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 MDFIC2A0A1B0GVS7 189 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TRIM77I1YAP6 450 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 CALCBP10092 127 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PRKACAP17612 351 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 RAB3AP20336 220 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 SNU13P55769 128 aaKnown RBP18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 WNT4P56705 351 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PDZD9Q8IXQ8 264 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 FAM58AQ8N1B3 248 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ZDHHC22Q8N966 263 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 OR51A2Q8NGJ7 313 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 SPATA3Q8NHX4 192 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TMEM106AQ96A25 262 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 C19orf12Q9NSK7 152 aa18.37■□□□□ 0.53
PTCHD3P2-201ENST00000424937 IGKV1-12A0A0C4DH73 117 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ALX3O95076 343 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ATP6V1G2O95670 118 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 HAND1O96004 215 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 IGKV1D-12P01611 117 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TK1P04183 234 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TAS2R43P59537 309 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PRB3Q04118 309 aaPredicted RBP18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 KISS1Q15726 138 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ASPHD2Q6ICH7 369 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 CRIP3Q6Q6R5 217 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 Q8N7P7 452 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ZFAND2BQ8WV99 257 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 GHSRQ92847 366 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ANKRD60Q9BZ19 345 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 SCN3BQ9NY72 215 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ERGIC3Q9Y282 383 aa18.36■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DNHD1Q96M86 4753 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 IGHV1-69DA0A0B4J2H0 117 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DNAJC9-AS1A6NH13 148 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PTGES3LE9PB15 166 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 IGHV1-69P01742 117 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 CDK1P06493 297 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 CHRM2P08172 466 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 MYF6P23409 242 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DUSP1P28562 367 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DLX1P56177 255 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms