RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PDCD1Q15116 288 aa9.91□□□□□ -0.82
SEC61A1-202ENST00000424880 TDRG1Q3Y452 100 aa9.91□□□□□ -0.82
SEC61A1-202ENST00000424880 ADAMTSL4Q6UY14 1074 aa9.91□□□□□ -0.82
SEC61A1-202ENST00000424880 DTWD2Q8NBA8 298 aa9.91□□□□□ -0.82
SEC61A1-202ENST00000424880 ADGRG7Q96K78 797 aa9.91□□□□□ -0.82
SEC61A1-202ENST00000424880 TCFL5Q9UL49 500 aa9.91□□□□□ -0.82
SEC61A1-202ENST00000424880 R4GMQ9 66 aa9.91□□□□□ -0.82
SEC61A1-202ENST00000424880 C5orf67F2Z3F1 127 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 NUDT21O43809 227 aaKnown RBP9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 CDC14BO60729 498 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 TTRP02766 147 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 CA3P07451 260 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 DRD3P35462 400 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 ELLP55199 621 aaPredicted RBP9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 GNB2P62879 340 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 TMEM31Q5JXX7 168 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 WBP2NLQ6ICG8 309 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 PSRC1Q6PGN9 363 aaPredicted RBP9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 ABHD12BQ7Z5M8 362 aaPredicted RBP9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 LYPD6Q86Y78 171 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 POC1BQ8TC44 478 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 HIST1H2AAQ96QV6 131 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 CCNL2Q96S94 520 aaPredicted RBP9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 FAAP24Q9BTP7 215 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 ARV1Q9H2C2 271 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 C5orf63A6NC05 138 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 EPHA1P21709 976 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 SEC13P55735 322 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 ICAM4Q14773 271 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 RTP5Q14D33 572 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 C9orf50Q5SZB4 431 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 ABLIM2Q6H8Q1 611 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 FBXW12Q6X9E4 464 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 ZNF765Q7L2R6 523 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 CALHM1Q8IU99 346 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 CA13Q8N1Q1 262 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 OSGIN2Q9Y236 505 aa9.9□□□□□ -0.82
SEC61A1-202ENST00000424880 NSG1A0A0A6YYJ2 146 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 H3BP45 60 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 TGOLN2O43493 480 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 TCF21O43680 179 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 SELEP16581 610 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 UCP3P55916 312 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 HERPUD1Q15011 391 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 ETFRF1Q6IPR1 90 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF66Q6ZN08 573 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 C1orf87Q8N0U7 546 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 TMEM171Q8WVE6 324 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 SRPK3Q9UPE1 567 aa9.9□□□□□ -0.83
SEC61A1-202ENST00000424880 IGLV1-36A0A0B4J1U3 117 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 K7N7A8 449 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 DCAF7P61962 342 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 GLO1Q04760 184 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 FDX2Q6P4F2 183 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 LIN37Q96GY3 246 aaPredicted RBP9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF319Q9P2F9 582 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 PITPNC1Q9UKF7 332 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 ESPL1Q14674 2120 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 M0QZK8 103 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 HMGB3O15347 200 aaKnown RBP9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 GPR137BO60478 399 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 GGCTO75223 188 aaKnown RBP9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 GCGP01275 180 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 HLA-HP01893 362 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 SMIM10L1P0DMW3 83 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 FSTP19883 344 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 SUCLG1P53597 346 aaKnown RBP9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 ARSJQ5FYB0 599 aaPredicted RBP9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 C1orf189Q5VU69 101 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 SMIM10Q96HG1 83 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 CCDC3Q9BQI4 270 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 GINS3Q9BRX5 216 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 FAM60AQ9NP50 221 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 MCTS1Q9ULC4 181 aaKnown RBP9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 LAMP3Q9UQV4 416 aa9.89□□□□□ -0.83
SEC61A1-202ENST00000424880 TP53I11O14683 189 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 TMEM225BP0DP42 221 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF20P17024 532 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 TBPP20226 339 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 CDAP32320 146 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 HLA-DRB3P79483 266 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF141Q15928 474 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF542PQ5EBM4 170 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 LCN15Q6UWW0 184 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 OR5D14Q8NGL3 314 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 OR14C36Q8NHC7 312 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 PTX4Q96A99 478 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 SHDQ96IW2 340 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 C5orf34Q96MH7 638 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 THAP10Q9P2Z0 257 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 TNRC18O15417 2968 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 HSPB2A8KAH6 182 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 TMEM14DPA8MWL7 114 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 E5RGE8 158 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 HPNP05981 417 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 IRF2P14316 349 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 IDH3GP51553 393 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 RPL27P61353 136 aaKnown RBP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 FOXK1P85037 733 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 HSPB2Q16082 182 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms