RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RGS19P49795 217 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 MTCP1P56278 107 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF616Q08AN1 781 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 RAB35Q15286 201 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM176BQ3YBM2 270 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SOHLH1Q5JUK2 328 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FBXW12Q6X9E4 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 RBMS3Q6XE24 437 aaKnown RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 ETV3LQ6ZN32 361 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 GALNTL5Q7Z4T8 443 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 CLEC18CQ8NCF0 446 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 OR10G3Q8NGC4 313 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 OR5D18Q8NGL1 313 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 OR10G4Q8NGN3 311 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 BOD1Q96IK1 185 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM56Q96MV1 263 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SLC25A31Q9H0C2 315 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SIRT7Q9NRC8 400 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SLC2A9Q9NRM0 540 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 ZDHHC8Q9ULC8 765 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 TMEM56-RWDD3S4R434 201 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 ARID1BQ8NFD5 2236 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 A0A1W2PPE3 182 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 C5orf63A6NC05 138 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A18PA6NE21 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A16PA6NEW6 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A7PA6NKC0 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF850A8MQ14 1090 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A22PA8MWA6 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A12PA8MX19 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A5PA8MXJ8 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A23PA8MXZ1 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF732B4DXR9 585 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 LINC01387J3KSC0 135 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 WRBO00258 174 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 PPIHO43447 177 aaKnown RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FBP1P09467 338 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A13PP0C7W8 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 FAM90A24PP0C7X0 464 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 CD81P60033 236 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 RSU1Q15404 277 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 EXT1Q16394 746 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF385CQ66K41 422 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SLC16A13Q7RTY0 426 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 LYZL2Q7Z4W2 148 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 Q8NFD4 153 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 RELTQ969Z4 430 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 SF3B5Q9BWJ5 86 aaKnown RBP13.24□□□□□ -0.29
C9orf3-204ENST00000424143 KIAA1456Q9P272 454 aa13.24□□□□□ -0.29
C9orf3-204ENST00000424143 F5H5K5 113 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 HSPA12AO43301 675 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 TGOLN2O43493 480 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 RAMP1O60894 148 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 PRH1P02810 166 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 CD63P08962 238 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 CST2P09228 141 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 GABRR1P24046 479 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 KRBOX4Q5JUW0 171 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 LCN10Q6JVE6 187 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 C20orf196Q8IYI0 205 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 FBXL14Q8N1E6 418 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 ZNF565Q8N9K5 539 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 SUMF2Q8NBJ7 301 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 RLN3Q8WXF3 142 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 MUCL1Q96DR8 90 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-204ENST00000424143 FAAP24Q9BTP7 215 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 PLEKHF2Q9H8W4 249 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 ELL3Q9HB65 397 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-204ENST00000424143 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
C9orf3-204ENST00000424143 KNL1Q8NG31 2342 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 OR5H15A6NDH6 313 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 TRDCB7Z8K6 153 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 YKT6O15498 198 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 CLN5O75503 358 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 SCGB1D2O95969 90 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 HTR5AP47898 357 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 RBP2P50120 134 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 RPS23P62266 143 aaKnown RBP13.22□□□□□ -0.29
C9orf3-204ENST00000424143 EWSR1Q01844 656 aaKnown RBP eCLIP13.22□□□□□ -0.29
C9orf3-204ENST00000424143 BAXQ07812 192 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 OR2C3Q8N628 320 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 OR13D1Q8NGV5 346 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 THAP3Q8WTV1 239 aaPredicted RBP13.22□□□□□ -0.29
C9orf3-204ENST00000424143 PIGTQ969N2 578 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 CYYR1Q96J86 154 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 RASL10BQ96S79 203 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 MIOXQ9UGB7 285 aa13.22□□□□□ -0.29
C9orf3-204ENST00000424143 RCL1Q9Y2P8 373 aaKnown RBP13.22□□□□□ -0.29
C9orf3-204ENST00000424143 TRAV1-1A0A0B4J248 108 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms