RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TUBG2Q9NRH3 451 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 MTCH1Q9NZJ7 389 aa17.9■□□□□ 0.46
GPC1-202ENST00000420138 SNRPGP15A8MWD9 76 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 PYCARD-AS1I3L0S3 204 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 GEMIN2O14893 280 aaKnown RBP17.89■□□□□ 0.45
GPC1-202ENST00000420138 CYB5AP00167 134 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 ZNF735P0CB33 412 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 GNG2P59768 71 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 GNG3P63215 75 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 C6orf201Q7Z4U5 140 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 WDR86Q86TI4 376 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 OR51S1Q8NGJ8 323 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 SLAMF9Q96A28 289 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 HS3ST6Q96QI5 342 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 TINAGL1Q9GZM7 467 aaPredicted RBP17.89■□□□□ 0.45
GPC1-202ENST00000420138 ELOVL5Q9NYP7 299 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 NPTNQ9Y639 398 aa17.89■□□□□ 0.45
GPC1-202ENST00000420138 M0QYG6 137 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 SYNGR1O43759 233 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 RAB3DO95716 219 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 SELEP16581 610 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 BCL3P20749 454 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 FAM76BQ5HYJ3 339 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 ELP2Q6IA86 826 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 LAMTOR1Q6IAA8 161 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 OR52W1Q6IF63 320 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 UNQ6126/PRO20091Q6UXV3 157 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 BATF2Q8N1L9 274 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 SNAPC3Q92966 411 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 FBXW5Q969U6 566 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 MUCL1Q96DR8 90 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 OR51I2Q9H344 312 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 PURGQ9UJV8 347 aaKnown RBP17.88■□□□□ 0.45
GPC1-202ENST00000420138 ST3GAL6Q9Y274 331 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 ZNF736B4DX44 427 aaPredicted RBP17.88■□□□□ 0.45
GPC1-202ENST00000420138 M0R1B8 84 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 CREBL2O60519 120 aaPredicted RBP17.88■□□□□ 0.45
GPC1-202ENST00000420138 NAT1P18440 290 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 KITLGP21583 273 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 MPZP25189 248 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 CA7P43166 264 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 MSMPQ1L6U9 139 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 ZNF626Q68DY1 528 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 RADILQ96JH8 1075 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 OCSTAMPQ9BR26 566 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 ZNF436Q9C0F3 470 aaPredicted RBP17.88■□□□□ 0.45
GPC1-202ENST00000420138 HSF4Q9ULV5 492 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 MEMO1Q9Y316 297 aa17.88■□□□□ 0.45
GPC1-202ENST00000420138 SERPINE3A8MV23 424 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 CA11O75493 328 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 CHATP28329 748 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 RBM11P57052 281 aaKnown RBP17.87■□□□□ 0.45
GPC1-202ENST00000420138 C1QTNF12Q5T7M4 302 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 MBNL2Q5VZF2 373 aaKnown RBP17.87■□□□□ 0.45
GPC1-202ENST00000420138 TMEM211Q6ICI0 200 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 ALKBH2Q6NS38 261 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 HAGHLQ6PII5 290 aaPredicted RBP17.87■□□□□ 0.45
GPC1-202ENST00000420138 SLC36A1Q7Z2H8 476 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 ZNF573Q86YE8 665 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 SPICQ8N5J4 248 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 RND1Q92730 232 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 DLL4Q9NR61 685 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 ZNF69Q9UC07 566 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 SCP2D1Q9UJQ7 156 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 OSGIN2Q9Y236 505 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 USP24Q9UPU5 2620 aa17.87■□□□□ 0.45
GPC1-202ENST00000420138 H0YL77 283 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 OR8G5Q8NG78 346 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 OR10AD1Q8NGE0 317 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 ZNF431Q8TF32 576 aaPredicted RBP17.86■□□□□ 0.45
GPC1-202ENST00000420138 PCDHB16Q9NRJ7 776 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 FZR1Q9UM11 496 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 HSPB11Q9Y547 144 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 C16orf97H3BN30 126 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 RLN1P04808 185 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 VSIG10L2P0DP72 767 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 FGF12P61328 243 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 IL24Q13007 206 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 ARL6IP1Q15041 203 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 NKAPLQ5M9Q1 402 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 MKXQ8IYA7 352 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 C1orf174Q8IYL3 243 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 C9orf62Q8N4C0 152 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 ADAT1Q9BUB4 502 aaKnown RBP17.86■□□□□ 0.45
GPC1-202ENST00000420138 PKIBQ9C010 78 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 IFT46Q9NQC8 304 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 PLEKHJ1Q9NW61 149 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 MGAT4AQ9UM21 535 aa17.86■□□□□ 0.45
GPC1-202ENST00000420138 MLNRO43193 412 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 FABP6P51161 128 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 NKX6-1P78426 367 aaPredicted RBP17.85■□□□□ 0.45
GPC1-202ENST00000420138 ARFRP1Q13795 201 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 PDCD1Q15116 288 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 ZNF718Q3SXZ3 478 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 NHLRC3Q5JS37 347 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 Q6ZR03 302 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 SLC7A5P1Q8MH63 180 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 EMG1Q92979 244 aaKnown RBP17.85■□□□□ 0.45
GPC1-202ENST00000420138 POM121Q96HA1 1249 aa17.85■□□□□ 0.45
GPC1-202ENST00000420138 SLC6A7Q99884 636 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms