RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ASPHD2Q6ICH7 369 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 FAM216BQ8N7L0 139 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 ST8SIA4Q92187 359 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 SDSLQ96GA7 329 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 GAFA1Q96PS6 74 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 SMURF1Q9HCE7 757 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 GLS2Q9UI32 602 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 INSIG2Q9Y5U4 225 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■■■□□ 17.8
SMARCB1-205ENST00000417137 KIR2DS1A0A191URI9 304 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 A0A1W2PPK0 400 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 ENSAO43768 121 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 LIPFP07098 398 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 AMY2BP19961 511 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 DDI2Q5TDH0 399 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 UNQ9370/PRO34162Q6UXP9 181 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 FAM58AQ8N1B3 248 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 BATF2Q8N1L9 274 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 ZNF561Q8N587 486 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 PNLDC1Q8NA58 520 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 OR52N4Q8NGI2 321 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 OR5D18Q8NGL1 313 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 EMG1Q92979 244 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 NUDT16L1Q9BRJ7 211 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 MRI1Q9BV20 369 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 ZNF222Q9UK12 451 aa19.18■□□□□ 0.66
SMARCB1-205ENST00000417137 IGHV2-70DA0A0C4DH43 119 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 ANGPTL7O43827 346 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 KDM4BO94953 1096 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 BCL3P20749 454 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 ZNF93P35789 620 aaPredicted RBP19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 SRP14P37108 136 aaKnown RBP19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 BTN2A1Q7KYR7 527 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 SPARTQ8N0X7 666 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 FCGR1BQ92637 280 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 ORAI1Q96D31 301 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 TMPRSS13Q9BYE2 586 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 NOX4Q9NPH5 578 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 SLC25A10Q9UBX3 287 aaPredicted RBP19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 OR14J1Q9UGF5 321 aa19.17■□□□□ 0.66
SMARCB1-205ENST00000417137 MALRD1Q5VYJ5 2156 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 F8VVB4 439 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 F8VWA3 439 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 CHRM2P08172 466 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 NPBWR2P48146 333 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 BMXP51813 675 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 CAV3P56539 151 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 ZP1P60852 638 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 PAX2Q02962 417 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 KCTD21Q4G0X4 260 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 ARMCX4Q5H9R4 360 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 ZNF773Q6PK81 442 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 CEACAM19Q7Z692 300 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 CDH26Q8IXH8 852 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 PHC2Q8IXK0 858 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 CD177Q8N6Q3 437 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 PXT1Q8NFP0 134 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 TNFAIP8L1Q8WVP5 186 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 TMEM203Q969S6 136 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 S100A13Q99584 98 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 SEBOXQ9HB31 216 aaPredicted RBP19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 TCF7L1Q9HCS4 588 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 RBFOX1Q9NWB1 397 aaKnown RBP19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 AUP1Q9Y679 476 aa19.16■□□□□ 0.66
SMARCB1-205ENST00000417137 TRAV8-7A0A075B6U6 113 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 A0A1B0GW55 424 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 MEGF11A6BM72 1044 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4L2P0CJ85 424 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4L3P0CJ86 424 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4L4P0CJ87 422 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4L5P0CJ88 424 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4L6P0CJ89 424 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4L7P0CJ90 424 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 NDUFB7P17568 137 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 PRKACAP17612 351 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 SRD5A1P18405 259 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 PTGFRP43088 359 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 CAPZA1P52907 286 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 PAX8Q06710 450 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DGUOKQ16854 277 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 SPIN3Q5JUX0 258 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 CRIP3Q6Q6R5 217 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4L9Q6RFH8 374 aaPredicted RBP19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 RNF144BQ7Z419 303 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 ZNRF1Q8ND25 227 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 TMEM185AQ8NFB2 350 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 PHYHIPQ92561 330 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DMRTB1Q96MA1 342 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 HMG20AQ9NP66 347 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 DUX4Q9UBX2 424 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 MAB21L2Q9Y586 359 aa19.15■□□□□ 0.66
SMARCB1-205ENST00000417137 IGKV1-12A0A0C4DH73 117 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 C22orf46C9J442 243 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 GABRPO00591 440 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 PIN1P1O15428 100 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 IGKV1D-12P01611 117 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 TFF1P04155 84 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 MAS1P04201 325 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 UBE2UQ5VVX9 321 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 IL17RELQ6ZVW7 336 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms