RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 TMEM127O75204 238 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 PTBP3O95758 552 aaKnown RBP17.06■□□□□ 0.32
PTPRU-203ENST00000415600 ANXA2P07355 339 aaKnown RBP17.06■□□□□ 0.32
PTPRU-203ENST00000415600 PMELP40967 661 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 OR8B8Q15620 311 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 PRAMEF6Q5VXH4 476 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 OR10AC1Q8NH08 325 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 UPRTQ96BW1 309 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 DIRAS2Q96HU8 199 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 SDHCQ99643 169 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-203ENST00000415600 OR52A1Q9UKL2 312 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 GTF2A1LQ9UNN4 478 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 TMEM269A0A1B0GVZ9 245 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 LGALS8O00214 317 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 TBX1O43435 398 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 HPGDSO60760 199 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 ISG15P05161 165 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 LIPFP07098 398 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 RBMXP38159 391 aaKnown RBP17.06■□□□□ 0.32
PTPRU-203ENST00000415600 SOX2P48431 317 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 CX3CR1P49238 355 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 BPIFB3P59826 476 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 ZNF79Q15937 498 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 WDR25Q64LD2 544 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-203ENST00000415600 METAP1DQ6UB28 335 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-203ENST00000415600 SNX29P2Q8IUI4 249 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 RDH10Q8IZV5 341 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 OR56B2PQ8NGI1 322 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 SGMS2Q8NHU3 365 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 CHPT1Q8WUD6 406 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 TECTBQ96PL2 329 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 SLITRK2Q9H156 845 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 ESM1Q9NQ30 184 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 FAM206AQ9NX38 181 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 DAPK2Q9UIK4 370 aa17.06■□□□□ 0.32
PTPRU-203ENST00000415600 DOCK11Q5JSL3 2073 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 hCG_1807616A0A1W2PRN6 198 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 MPPED2Q15777 294 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 ODF4Q2M2E3 257 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 KLF17Q5JT82 389 aaPredicted RBP17.05■□□□□ 0.32
PTPRU-203ENST00000415600 FAM201AQ5SY85 155 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 FAM131AQ6UXB0 335 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 LYSMD2Q8IV50 215 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 BOLLQ8N9W6 283 aaKnown RBP17.05■□□□□ 0.32
PTPRU-203ENST00000415600 OR51A4Q8NGJ6 313 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 TSEN15Q8WW01 171 aaKnown RBP17.05■□□□□ 0.32
PTPRU-203ENST00000415600 PPP1R14AQ96A00 147 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 TMEM106AQ96A25 262 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 SPSB4Q96A44 273 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 ORAI1Q96D31 301 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 SRRQ9GZT4 340 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 OR10A2Q9H208 303 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 RGCCQ9H4X1 137 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 TCF7L1Q9HCS4 588 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 ABCB10Q9NRK6 738 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 C1orf123Q9NWV4 160 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 ABRACLQ9P1F3 81 aa17.05■□□□□ 0.32
PTPRU-203ENST00000415600 AK6Q9Y3D8 172 aaKnown RBP17.05■□□□□ 0.32
PTPRU-203ENST00000415600 FABP12A6NFH5 140 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 OOEPA6NGQ2 149 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 CLDN34H7C241 214 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 SLC2A1P11166 492 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 PTBP1P26599 531 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTPRU-203ENST00000415600 GNALP38405 381 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 PAX2Q02962 417 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 C11orf91Q3C1V1 193 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 BCL2L15Q5TBC7 163 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 GPR157Q5UAW9 335 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 TMEM244Q5VVB8 128 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 Q6ZNX1 250 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 C9orf139Q6ZV77 190 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 GFI1Q99684 422 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 SOSTQ9BQB4 213 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 MOB1AQ9H8S9 216 aa17.04■□□□□ 0.32
PTPRU-203ENST00000415600 DNAJC9-AS1A6NH13 148 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 GRPP07492 148 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 UBCP0CG48 685 aaKnown RBP17.03■□□□□ 0.32
PTPRU-203ENST00000415600 SLC2A2P11168 524 aaPredicted RBP17.03■□□□□ 0.32
PTPRU-203ENST00000415600 ATF1P18846 271 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 PSMA6P60900 246 aaKnown RBP17.03■□□□□ 0.32
PTPRU-203ENST00000415600 AWAT1Q58HT5 328 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 CNIH2Q6PI25 160 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 LRRTM1Q86UE6 522 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 PNLDC1Q8NA58 520 aaKnown RBP17.03■□□□□ 0.32
PTPRU-203ENST00000415600 CSNK2A3Q8NEV1 391 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 REEP6Q96HR9 211 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 HHLA2Q9UM44 414 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 DHDHQ9UQ10 334 aa17.03■□□□□ 0.32
PTPRU-203ENST00000415600 TRAV40A0A0B4J280 105 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 C3orf80F5H4A9 247 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 HKR1P10072 659 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 TUSC1Q2TAM9 212 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 STEAP3Q658P3 488 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 SFRP4Q6FHJ7 346 aaPredicted RBP17.02■□□□□ 0.32
PTPRU-203ENST00000415600 ELMOD2Q8IZ81 293 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 MINDY2Q8NBR6 621 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 TRMT10AQ8TBZ6 339 aaKnown RBP17.02■□□□□ 0.32
PTPRU-203ENST00000415600 V9GY05 133 aa17.02■□□□□ 0.32
PTPRU-203ENST00000415600 ANXA2P2A6NMY6 339 aa17.02■□□□□ 0.31
PTPRU-203ENST00000415600 AIPO00170 330 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms