RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GPR22Q99680 433 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 VCX3BQ9H321 246 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 TMPRSS5Q9H3S3 457 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 TMEM38AQ9H6F2 299 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 SIAEQ9HAT2 523 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 WFDC1Q9HC57 220 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FBXO6Q9NRD1 293 aaPredicted RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 RCL1Q9Y2P8 373 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 ACOT9Q9Y305 439 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ARL5AQ9Y689 179 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 A0A0G2JND7 137 aa2□□□□□ -2.09
MCF2-204ENST00000414978 A0A0G2JRQ6 117 aa2□□□□□ -2.09
MCF2-204ENST00000414978 KIR2DS1A0A191URI9 304 aa2□□□□□ -2.09
MCF2-204ENST00000414978 LOC110117498-PIK3R3F6TDL0 507 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CCL22O00626 93 aa2□□□□□ -2.09
MCF2-204ENST00000414978 PLIN3O60664 434 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RAMP1O60894 148 aa2□□□□□ -2.09
MCF2-204ENST00000414978 DCTN3O75935 186 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ETHE1O95571 254 aa2□□□□□ -2.09
MCF2-204ENST00000414978 C2P06681 752 aa2□□□□□ -2.09
MCF2-204ENST00000414978 KLK2P20151 261 aa2□□□□□ -2.09
MCF2-204ENST00000414978 HTR2CP28335 458 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CD70P32970 193 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RAB10P61026 200 aa2□□□□□ -2.09
MCF2-204ENST00000414978 GNB1P62873 340 aa2□□□□□ -2.09
MCF2-204ENST00000414978 KIR2DS1Q14954 304 aa2□□□□□ -2.09
MCF2-204ENST00000414978 MICAQ29983 383 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CLVS2Q5SYC1 327 aa2□□□□□ -2.09
MCF2-204ENST00000414978 PAGE2Q7Z2X7 111 aa2□□□□□ -2.09
MCF2-204ENST00000414978 LRRTM1Q86UE6 522 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CRLF3Q8IUI8 442 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR2V1Q8NHB1 315 aa2□□□□□ -2.09
MCF2-204ENST00000414978 WFDC5Q8TCV5 224 aa2□□□□□ -2.09
MCF2-204ENST00000414978 VOPP1Q96AW1 172 aa2□□□□□ -2.09
MCF2-204ENST00000414978 FBXO17Q96EF6 278 aa2□□□□□ -2.09
MCF2-204ENST00000414978 DNAJC1Q96KC8 554 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 ZNF75AQ96N20 296 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TRIB3Q96RU7 358 aa2□□□□□ -2.09
MCF2-204ENST00000414978 HBEGFQ99075 208 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RNF126Q9BV68 326 aa2□□□□□ -2.09
MCF2-204ENST00000414978 FBXL12Q9NXK8 326 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ST3GAL6Q9Y274 331 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR51B4Q9Y5P0 310 aa2□□□□□ -2.09
MCF2-204ENST00000414978 USH1CQ9Y6N9 552 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RP1L1Q8IWN7 2480 aaPredicted RBP2□□□□□ -2.09
MCF2-204ENST00000414978 F8P00451 2351 aa2□□□□□ -2.09
MCF2-204ENST00000414978 PIEZO2Q9H5I5 2752 aa2□□□□□ -2.09
MCF2-204ENST00000414978 C1orf232A0A0U1RR37 186 aa2□□□□□ -2.09
MCF2-204ENST00000414978 A0A1B0GVI7 797 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR51F1A6NGY5 319 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ANKRD65E5RJM6 399 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CDC7O00311 574 aa2□□□□□ -2.09
MCF2-204ENST00000414978 HLA-HP01893 362 aa2□□□□□ -2.09
MCF2-204ENST00000414978 SERPINE1P05121 402 aa2□□□□□ -2.09
MCF2-204ENST00000414978 PET100P0DJ07 73 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TCN2P20062 427 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OGNP20774 298 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 FMO3P31513 532 aa2□□□□□ -2.09
MCF2-204ENST00000414978 GGT2P36268 569 aa2□□□□□ -2.09
MCF2-204ENST00000414978 MAGEA12P43365 314 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR1D4P47884 311 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TDGF1P3P51864 188 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RND2P52198 227 aa2□□□□□ -2.09
MCF2-204ENST00000414978 DLX5P56178 289 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TAS2R39P59534 338 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RPL26P61254 145 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 MS4A2Q01362 244 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RGNQ15493 299 aa2□□□□□ -2.09
MCF2-204ENST00000414978 VAMP3Q15836 100 aa2□□□□□ -2.09
MCF2-204ENST00000414978 MOGQ16653 247 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TMEM249Q2WGJ8 235 aa2□□□□□ -2.09
MCF2-204ENST00000414978 EIPR1Q53HC9 387 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CYBRD1Q53TN4 286 aa2□□□□□ -2.09
MCF2-204ENST00000414978 SAXO2Q658L1 398 aa2□□□□□ -2.09
MCF2-204ENST00000414978 C11orf87Q6NUJ2 197 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ZCCHC23Q6ZST2 131 aa2□□□□□ -2.09
MCF2-204ENST00000414978 SNX20Q7Z614 316 aa2□□□□□ -2.09
MCF2-204ENST00000414978 HIPK1Q86Z02 1210 aa2□□□□□ -2.09
MCF2-204ENST00000414978 C10orf107Q8IVU9 208 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TMEM61Q8N0U2 210 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CCDC54Q8NEL0 328 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ATP6V1C2Q8NEY4 427 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR4K2Q8NGD2 314 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR13C4Q8NGS5 318 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR6K2Q8NGY2 324 aa2□□□□□ -2.09
MCF2-204ENST00000414978 MRAPQ8TCY5 172 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TMEM158Q8WZ71 300 aa2□□□□□ -2.09
MCF2-204ENST00000414978 PPP1R14BQ96C90 147 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ZMYND19Q96E35 227 aaPredicted RBP2□□□□□ -2.09
MCF2-204ENST00000414978 PACRGQ96M98 296 aaPredicted RBP2□□□□□ -2.09
MCF2-204ENST00000414978 IP6K3Q96PC2 410 aa2□□□□□ -2.09
MCF2-204ENST00000414978 MCHR1Q99705 422 aa2□□□□□ -2.09
MCF2-204ENST00000414978 POLR2J2Q9GZM3 115 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 POLR2J3Q9H1A7 115 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 NLE1Q9NVX2 485 aaPredicted RBP2□□□□□ -2.09
MCF2-204ENST00000414978 SLC25A37Q9NYZ2 338 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TMEM216Q9P0N5 145 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RARRES3Q9UL19 164 aa2□□□□□ -2.09
MCF2-204ENST00000414978 RPL26L1Q9UNX3 145 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 NME4O00746 187 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms